Gene detail information of Glyur000043s00003764 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G52140.1 | 1.00E-33 | |
| NR | XP_003597684.1 | 1.21E-98 | hypothetical protein MTR_2g101120 [Medicago truncatula] |
| trEMBL | tr|G7II06|G7II06_MEDTR | 5.00E-99 | Avr9/Cf-9 rapidly elicited protein {ECO:0000313|EMBL:AES67935.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00043 | 36268 | 36849 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000043s00003764.1 | PF05553.6 | DUF761 | 171 | 192 | 9.80E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.744 |
| SRR1783600 | control | 6.730 |
| SRR1783602 | moderate drought stress | 3.747 |
| SRR1811619 | moderate drought stress | 3.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.451 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.458 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.561 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.394 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.888 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.546 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 60.679 |
| SRR2868004 | Drought Stress (root) | 80.141 |
| SRR2967015 | Control (root) | 107.537 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.271 |
| SRR9715740 | Leaf | 1.237 |
| SRR9715741 | Leaf | 1.075 |
| SRR9715739 | Root | 17.012 |
| SRR9715742 | Root | 41.925 |
| SRR9715743 | Root | 33.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 286.341 |
| SRR8749028 | MeJA induced 9h | 329.327 |
| SRR8749029 | MeJA induced 9h | 376.989 |
| SRR8749030 | Uninduced | 260.855 |
| SRR8749031 | Uninduced | 18.546 |
| SRR8749032 | Uninduced | 53.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.771 |
| SRR8400027 | Control - Root | 14.983 |