Gene detail information of Glyur000042s00005103.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G37260.15.00E-75myb domain protein 73
NRAHB59606.11.09E-180putative MYB-related protein 20 [Arachis hypogaea]
Swissprottr|Q9FDW1|MYB44_ARATH2.00E-93Transcription factor MYB44
trEMBLtr|V5T7X2|V5T7X2_ARAHY0Putative MYB-related protein 20 {ECO:0000313|EMBL:AHB59606.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00042369958370905-


Gene family

Gene familysubfamily
Transcription Factors FamilyMYB
EAR motif-containing ProteinsMYB


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000042s00005103.1PF13921.1Myb_DNA-bind_617755.30E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control81.838
SRR1783600control82.368
SRR1783602moderate drought stress171.313
SRR1811619moderate drought stress171.361

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain273.768
DRR006520Root Summer glycyrrhizin high producing strain266.850
DRR006521Root Winter glycyrrhizin high producing strain180.175
DRR006522Root Winter glycyrrhizin high producing strain173.432
DRR006523Root Summer glycyrrhizin low producing strain372.326
DRR006524Root Summer glycyrrhizin low producing strain316.876
DRR006525Leaf Summer glycyrrhizin high producing strain115.960
DRR006526Leaf Summer glycyrrhizin high producing strain114.603

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)92.134
SRR2868004Drought Stress (root)180.394
SRR2967015Control (root)268.932

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf224.373
SRR9715740Leaf223.389
SRR9715741Leaf292.302
SRR9715739Root286.735
SRR9715742Root245.017
SRR9715743Root215.179

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h472.318
SRR8749028MeJA induced 9h478.894
SRR8749029MeJA induced 9h385.326
SRR8749030Uninduced411.371
SRR8749031Uninduced308.581
SRR8749032Uninduced498.281

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root73.616
SRR8400027Control - Root133.231

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved