Gene detail information of Glyur000042s00005100 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G37300.1 | 2.00E-39 | maternal effect embryo arrest 59 |
| NR | XP_004511883.1 | 3.98E-93 | PREDICTED: uncharacterized protein LOC101506585 [Cicer arietinum] |
| trEMBL | tr|C6T5F2|C6T5F2_SOYBN | 2.00E-91 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G39750.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00042 | 359943 | 361299 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 297.905 |
| SRR1783600 | control | 300.001 |
| SRR1783602 | moderate drought stress | 446.919 |
| SRR1811619 | moderate drought stress | 444.938 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 435.291 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 431.345 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 897.013 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 877.914 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 656.083 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 655.526 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.633 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.570 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 154.968 |
| SRR2868004 | Drought Stress (root) | 181.352 |
| SRR2967015 | Control (root) | 276.925 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 25.094 |
| SRR9715740 | Leaf | 19.032 |
| SRR9715741 | Leaf | 24.643 |
| SRR9715739 | Root | 268.416 |
| SRR9715742 | Root | 186.426 |
| SRR9715743 | Root | 192.391 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 107.344 |
| SRR8749028 | MeJA induced 9h | 148.710 |
| SRR8749029 | MeJA induced 9h | 152.901 |
| SRR8749030 | Uninduced | 157.690 |
| SRR8749031 | Uninduced | 108.852 |
| SRR8749032 | Uninduced | 228.169 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 279.793 |
| SRR8400027 | Control - Root | 225.917 |