Gene detail information of Glyur000042s00005090 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G43100.1 | 5.00E-40 | Eukaryotic aspartyl protease family protein |
| NR | XP_003516613.1 | 1.99E-87 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Glycine max] |
| Swissprot | tr|Q9S9K4|ASPL2_ARATH | 4.00E-25 | Aspartic proteinase-like protein 2 (Precursor) |
| trEMBL | tr|I1J9B5|I1J9B5_SOYBN | 7.00E-88 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G39800.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00042 | 302552 | 306892 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000042s00005090.1 | PF14541.1 | TAXi_C | 1 | 63 | 7.40E-10 |
| Glyur000042s00005090.2 | PF14543.1 | TAXi_N | 2 | 84 | 3.00E-12 |
| Glyur000042s00005090.2 | PF14541.1 | TAXi_C | 119 | 272 | 6.40E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.511 |
| SRR1783600 | control | 17.258 |
| SRR1783602 | moderate drought stress | 17.474 |
| SRR1811619 | moderate drought stress | 18.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.997 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.095 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 61.079 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 58.232 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.266 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.878 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.889 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.850 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.028 |
| SRR2868004 | Drought Stress (root) | 41.154 |
| SRR2967015 | Control (root) | 45.949 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.836 |
| SRR9715740 | Leaf | 22.854 |
| SRR9715741 | Leaf | 29.045 |
| SRR9715739 | Root | 7.436 |
| SRR9715742 | Root | 10.578 |
| SRR9715743 | Root | 12.701 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.103 |
| SRR8749028 | MeJA induced 9h | 29.138 |
| SRR8749029 | MeJA induced 9h | 5.436 |
| SRR8749030 | Uninduced | 25.117 |
| SRR8749031 | Uninduced | 34.521 |
| SRR8749032 | Uninduced | 17.970 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.133 |
| SRR8400027 | Control - Root | 17.001 |