Gene detail information of Glyur000042s00005078 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G37480.1 | 6.00E-152 | Chaperone DnaJ-domain superfamily protein |
| NR | XP_003516614.1 | 0 | PREDICTED: uncharacterized protein LOC100805332 [Glycine max] |
| COG | YP_002496380.1 | 4.00E-13 | heat shock protein DnaJ domain-containing protein [Methylobacterium nodulans ORS 2060] |
| Swissprot | tr|Q38813|DNAJ1_ARATH | 6.00E-11 | Chaperone protein dnaJ 1, mitochondrial (Precursor) |
| trEMBL | tr|K7K4N8|K7K4N8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G39880.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00042 | 236602 | 242116 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000042s00005078.1 | PF00226.26 | DnaJ | 144 | 208 | 4.30E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.600 |
| SRR1783600 | control | 9.660 |
| SRR1783602 | moderate drought stress | 12.393 |
| SRR1811619 | moderate drought stress | 12.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.935 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.112 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.179 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.047 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.250 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.024 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.596 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.545 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.236 |
| SRR2868004 | Drought Stress (root) | 11.010 |
| SRR2967015 | Control (root) | 10.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.240 |
| SRR9715740 | Leaf | 4.534 |
| SRR9715741 | Leaf | 5.818 |
| SRR9715739 | Root | 1.159 |
| SRR9715742 | Root | 5.345 |
| SRR9715743 | Root | 5.012 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.048 |
| SRR8749028 | MeJA induced 9h | 3.228 |
| SRR8749029 | MeJA induced 9h | 0.951 |
| SRR8749030 | Uninduced | 1.635 |
| SRR8749031 | Uninduced | 0.860 |
| SRR8749032 | Uninduced | 0.727 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.538 |
| SRR8400027 | Control - Root | 13.418 |