Gene detail

Gene detail information of Glyur000042s00005067

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G37530.1	3.00E-126	Peroxidase superfamily protein
NR	KHN12986.1	0	Peroxidase 51 [Glycine soja]
Swissprot	tr\|Q9SZE7\|PER51_ARATH	5.00E-157	Peroxidase 51 (Precursor)
trEMBL	tr\|C6TL64\|C6TL64_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA11G05300.1}

Sequence

Transcript Sequence

>Glyur000042s00005067.1
CCCTTACTTTTTCCACTTAAACCATAATTCCCTCCCACACTCACTTGCATTTTATAATCCTCCTTTACCTCCCGGCTCCCACACACTGCAAAAAAGAGCAAAATGGCTCAGATTAATCTTGTACTTGTCTGGTTACTCTTCTTAACCTTGTGTCTTATTTCATGTCCTACTTCGGCCCAGCTTAGTCGACACCACTACAAGAATACCTGCCCCAATGTTCAAAACATCGTCAGAGAAGCTGTCAAGAAGAAATTNCATCAGACATTTGTGACAGTCCCTGCTACTCTTCGTCTCTTCTTCCACGACTGCTTTGTGCATGGTTGTGATGCTTCTGTTTTGGTAGCATCAACAGCACACAACAAAGCAGAGAGGGATCACCCAGACAATCTTTCATTGGCCGGAGATGGATTTGACACAGTGATCAAAGCCAAAGAAGCGGTGGATGCTGTTCCTCTATGCAGGAATAAAGTTTCTTGCGCTGATATTCTCGCCATGGCAGCCCGGGATGTTATTGTGCTGGCCGGTGGACCTTACTTTGAGGTTGAATTGGGGAGATTTGATGGGCTAAGATCTAAAGCTTCAGATGTNAATGGGAGGCTCCCAGAGCCAGGCTTCAACTTGAACCAGCTGAATTCCCTGTTTGCGTCTAACGGGCTTACACAAACGGAAATGATTGCACTTTCAGGTGCTCACACCGTTGGATTCTCGCACTGCAACAAGTTCACCAACAGAGTATATGATTTCAAGAGCAAAAGTCGAGTGGATCCTACATTAAACCTGCTATACGCATCAAAACTAAAATCAATGTGCCCGAGGAACGTGGATCCGAGGGTCGCCATCGACATGGACCCAACCACTCCACGGGCATTCGACAATGTTTATTTCAAGAATCTTAAGGAGGGGAAGGGCTTGTTCACTTCAGACCAAGTTCTCTTCACGGACCGAAGGTCCAAAGCCACAGTTAATGCTTTCGCCAGTAGTAGCAAAATCTTCCGCGCCAACTTCATTGCTGCCATGACCAAATTGGGCCGAGTTGGAGTAAAAAACGCACATAATGGGAACATTCGTACGGATTGTTCGGTGATTTAATTCACAGCACAAGTTAGAATGTTAAGGAGGACGTTATGGCAAATTAAGTGAATACATTTTGATGTACATTTGTTTTCCTTTATGCTTAAAATAATAAGCACTGAACGTAGTTAATTTCTCAACAGGCATGATTCCTCCGTATTATTTTGTCGATTTAAATTTTTTTTTCTTCGGTTGTTCGCTTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00042	181407	183691	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function

GO:0004601 peroxidase activity

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000042s00005067.1	PF00141.18	peroxidase	43	293	2.40E-68

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	28.127
SRR1783600	control	28.285
SRR1783602	moderate drought stress	27.472
SRR1811619	moderate drought stress	27.476

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	80.573
DRR006520	Root Summer glycyrrhizin high producing strain	79.616
DRR006521	Root Winter glycyrrhizin high producing strain	10.937
DRR006522	Root Winter glycyrrhizin high producing strain	10.670
DRR006523	Root Summer glycyrrhizin low producing strain	21.043
DRR006524	Root Summer glycyrrhizin low producing strain	21.230
DRR006525	Leaf Summer glycyrrhizin high producing strain	66.219
DRR006526	Leaf Summer glycyrrhizin high producing strain	66.072

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	30.775
SRR2868004	Drought Stress (root)	10.515
SRR2967015	Control (root)	18.816

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	12.360
SRR9715740	Leaf	8.351
SRR9715741	Leaf	8.896
SRR9715739	Root	11.705
SRR9715742	Root	18.892
SRR9715743	Root	17.273

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.382
SRR8749028	MeJA induced 9h	0.789
SRR8749029	MeJA induced 9h	0.825
SRR8749030	Uninduced	0.050
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.089

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	37.635
SRR8400027	Control - Root	63.455