Gene detail information of Glyur000042s00005058 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004511854.1 | 0 | PREDICTED: UPF0553 protein-like isoform X2 [Cicer arietinum] |
| trEMBL | tr|V7CIK4|V7CIK4_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW28721.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00042 | 135642 | 140874 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000042s00005058.1 | PF10343.4 | DUF2419 | 45 | 273 | 1.90E-79 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.668 |
| SRR1783600 | control | 2.663 |
| SRR1783602 | moderate drought stress | 2.056 |
| SRR1811619 | moderate drought stress | 2.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.751 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.630 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.369 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.362 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.732 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.695 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.253 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.276 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.626 |
| SRR2868004 | Drought Stress (root) | 5.618 |
| SRR2967015 | Control (root) | 3.865 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.824 |
| SRR9715740 | Leaf | 2.502 |
| SRR9715741 | Leaf | 4.181 |
| SRR9715739 | Root | 3.406 |
| SRR9715742 | Root | 4.025 |
| SRR9715743 | Root | 4.351 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 51.936 |
| SRR8749028 | MeJA induced 9h | 27.753 |
| SRR8749029 | MeJA induced 9h | 34.371 |
| SRR8749030 | Uninduced | 12.221 |
| SRR8749031 | Uninduced | 16.599 |
| SRR8749032 | Uninduced | 24.997 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.963 |
| SRR8400027 | Control - Root | 6.804 |