Gene detail

Gene detail information of Glyur000042s00005053.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G23060.1	5.00E-159	Acyl-CoA N-acyltransferases (NAT) superfamily protein
NR	XP_007156726.1	0	hypothetical protein PHAVU_002G012000g [Phaseolus vulgaris]
COG	YP_008433243.1	2.00E-07	hypothetical protein N186_09470 [Thermofilum sp. 1910b]
Swissprot	tr\|O64815\|HLS1L_ARATH	0	Probable N-acetyltransferase HLS1-like
trEMBL	tr\|V7CHH6\|V7CHH6_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW28720.1}

Sequence

Transcript Sequence

>Glyur000042s00005053.1
ATGGGTGAAGTAGCATTGGTTGTGAGNGTGTACGACCCTAATAAAGACAGAGAAAGAGTAGAAGCGGTTGAAAGGACATGTGAGGTTGGACCCAGTGACAAGCTNTCTCTCTTCACCGACATGCTCGGCGACCCTATTTGCAGGGTCCGCCACTCACCCTCTTTCCTCATGCTGGTGGTGGAGATGGGTGAAGAGATAGTAGGGATGATAAGGGGTTGTATAAAGACCGTCACATGCGGTNAGAAGCACTCAAGAAGCGGAGGAAAGCACGACAAACACGTCCCAATATACACCAAAGTCGCCTACATATTGGGCCTTCGCGTTTCTCCCAATCATCGGAGAATGGGAATAGGGTTGAAGCTGGTACACAAAATGGAGGCGTGGTTGAAGGACCATGGTGCTGAATACTCCTACATGGCAACGGAAAACGACAATTTAGCGTCCGTTAAACTGTTCACCGACAAATGCGGGTATTCAAAGTTCCGTACCCCGTCCATCCTTGTCAACCCCGTTTTCGCCCATAGGGCCAAGGTGTCCCCAAACGTCACCATCATTCCCCTCTCTCCCTCCGACGCCGAGACCCTCTACCGCCGCCGCTGCGCCACCACCGAGTTCTTCCCCCGCGACGTTGACTCCGTCCTTAAAAACAAGCTCAGCCTCGGCACCTTCCTCGCTGTCCCACGTGGGTCCTACNGCGCCGAATCCTGGCCCGGCCCAGATCGCTTCCTATTGGGCCCGCCTCACTCCTGGGCCCTCCTCAGTGTATGGAACGCGAAGGAGGTGTACACGCTCGAGGTGCGTGGCGCGTCGCGCGTTAATCGAGCGCTCGCAAAGACGACACGTTTGGTGGACCGGGCCTTGCCTTGGCTGCGGTTGCCGTCGTTTCCGGATTTGTTCAGGCCGTTTGGGTTTCATTTCTTGTATGGGCTTGGAGGTGAAGGCCCAGAGGCGGTGAAGATGGTGAGGGCCCTGTGTGGGTTCGCCCATAACCTCGCCATGGAACGTGGGTGCGGGGTGGTGATCACTGAAGTTGCCGCACGCGAGCCTTTACGGCTTGGAATACCACACTGGAAGATGCTGTCATTTGAGGATTTATGGTGCATCAAGAGGCTCGCCGAAGATTACAGCGATGGCTCCGTCGGTGACTGGACCAAATCTGCACCGGGCATCTCCATTTTTGTTGANCCCAGAGAGATCTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00042	109992	111551	-

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0008080 N-acetyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000042s00005053.1	PF00583.19	Acetyltransf_1	67	158	4.40E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.531
SRR1783600	control	0.512
SRR1783602	moderate drought stress	0.659
SRR1811619	moderate drought stress	0.621

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.375
DRR006520	Root Summer glycyrrhizin high producing strain	1.493
DRR006521	Root Winter glycyrrhizin high producing strain	0.637
DRR006522	Root Winter glycyrrhizin high producing strain	0.609
DRR006523	Root Summer glycyrrhizin low producing strain	2.037
DRR006524	Root Summer glycyrrhizin low producing strain	2.039
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.054
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.963
SRR2868004	Drought Stress (root)	6.547
SRR2967015	Control (root)	5.846

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.000
SRR9715740	Leaf	0.048
SRR9715741	Leaf	0.234
SRR9715739	Root	0.603
SRR9715742	Root	0.654
SRR9715743	Root	1.431

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	374.566
SRR8749028	MeJA induced 9h	226.714
SRR8749029	MeJA induced 9h	78.209
SRR8749030	Uninduced	51.176
SRR8749031	Uninduced	1.583
SRR8749032	Uninduced	9.630

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.527
SRR8400027	Control - Root	1.192