Gene detail information of Glyur000042s00005045 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G67480.2 | 9.00E-15 | BTB and TAZ domain protein 4 |
| NR | AFK49449.1 | 5.80E-30 | unknown [Lotus japonicus] |
| Swissprot | tr|Q9FJX5|BT4_ARATH | 5.00E-17 | BTB/POZ and TAZ domain-containing protein 4 |
| trEMBL | tr|I3TAA7|I3TAA7_LOTJA | 2.00E-30 | Uncharacterized protein {ECO:0000313|EMBL:AFK49449.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00042 | 63644 | 67835 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.057 |
| SRR1783600 | control | 8.237 |
| SRR1783602 | moderate drought stress | 12.958 |
| SRR1811619 | moderate drought stress | 13.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.595 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.081 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 88.952 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 86.152 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.716 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.489 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.764 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.597 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.185 |
| SRR2868004 | Drought Stress (root) | 25.827 |
| SRR2967015 | Control (root) | 50.240 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.942 |
| SRR9715740 | Leaf | 1.473 |
| SRR9715741 | Leaf | 6.186 |
| SRR9715739 | Root | 2.873 |
| SRR9715742 | Root | 7.006 |
| SRR9715743 | Root | 6.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.876 |
| SRR8749028 | MeJA induced 9h | 31.162 |
| SRR8749029 | MeJA induced 9h | 18.393 |
| SRR8749030 | Uninduced | 17.987 |
| SRR8749031 | Uninduced | 74.448 |
| SRR8749032 | Uninduced | 50.021 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.867 |
| SRR8400027 | Control - Root | 5.649 |