Gene detail information of Glyur000041s00007109 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G15520.1 | 7.00E-18 | pleiotropic drug resistance 12 |
| NR | KDO44270.1 | 4.66E-22 | hypothetical protein CISIN_1g0466561mg, partial [Citrus sinensis] |
| Swissprot | tr|O24367|TUR2_SPIPO | 1.00E-21 | Pleiotropic drug resistance protein TUR2 |
| trEMBL | tr|A0A067DRT2|A0A067DRT2_CITSI | 2.00E-22 | Uncharacterized protein {ECO:0000313|EMBL:KDO44270.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00041 | 209914 | 218297 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.834 |
| SRR1783600 | control | 3.483 |
| SRR1783602 | moderate drought stress | 4.465 |
| SRR1811619 | moderate drought stress | 4.264 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.475 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.104 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.695 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.063 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.206 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.444 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.103 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.190 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.803 |
| SRR2868004 | Drought Stress (root) | 11.306 |
| SRR2967015 | Control (root) | 14.469 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.975 |
| SRR9715740 | Leaf | 2.760 |
| SRR9715741 | Leaf | 5.426 |
| SRR9715739 | Root | 2.633 |
| SRR9715742 | Root | 9.125 |
| SRR9715743 | Root | 8.436 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.029 |
| SRR8749028 | MeJA induced 9h | 2.802 |
| SRR8749029 | MeJA induced 9h | 2.732 |
| SRR8749030 | Uninduced | 4.876 |
| SRR8749031 | Uninduced | 5.062 |
| SRR8749032 | Uninduced | 6.562 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.826 |
| SRR8400027 | Control - Root | 16.309 |