Gene detail information of Glyur000041s00007087 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G52140.1 | 2.00E-32 | |
| NR | XP_003627010.1 | 8.19E-93 | hypothetical protein MTR_8g014030 [Medicago truncatula] |
| trEMBL | tr|G7LFZ0|G7LFZ0_MEDTR | 3.00E-93 | Avr9/Cf-9 rapidly elicited protein {ECO:0000313|EMBL:AET01486.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00041 | 52560 | 53156 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000041s00007087.1 | PF05553.6 | DUF761 | 176 | 195 | 1.20E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.513 |
| SRR1783600 | control | 6.838 |
| SRR1783602 | moderate drought stress | 6.375 |
| SRR1811619 | moderate drought stress | 5.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.260 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.604 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.443 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.129 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.897 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.966 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.692 |
| SRR2868004 | Drought Stress (root) | 26.480 |
| SRR2967015 | Control (root) | 31.388 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 29.520 |
| SRR9715740 | Leaf | 8.174 |
| SRR9715741 | Leaf | 15.435 |
| SRR9715739 | Root | 22.739 |
| SRR9715742 | Root | 48.218 |
| SRR9715743 | Root | 41.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.091 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.866 |
| SRR8749030 | Uninduced | 0.998 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.712 |
| SRR8400027 | Control - Root | 18.117 |