Gene detail information of Glyur000040s00007402 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12630.1 | 5.00E-31 | A20/AN1-like zinc finger family protein |
| NR | XP_004510979.1 | 9.21E-65 | PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Cicer arietinum] |
| Swissprot | tr|Q9LHJ8|SAP5_ARATH | 3.00E-40 | Zinc finger A20 and AN1 domain-containing stress-associated protein 5 |
| trEMBL | tr|I3S808|I3S808_MEDTR | 9.00E-65 | Uncharacterized protein {ECO:0000313|EMBL:AFK36400.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00040 | 470787 | 471206 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000040s00007402.1 | PF01428.11 | zf-AN1 | 80 | 119 | 3.40E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 369.058 |
| SRR1783600 | control | 366.477 |
| SRR1783602 | moderate drought stress | 354.110 |
| SRR1811619 | moderate drought stress | 349.467 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 596.093 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 602.770 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 64.377 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 63.527 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1387.233 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1380.562 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 169.212 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 162.499 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 245.244 |
| SRR2868004 | Drought Stress (root) | 392.194 |
| SRR2967015 | Control (root) | 391.264 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 400.467 |
| SRR9715740 | Leaf | 427.880 |
| SRR9715741 | Leaf | 557.341 |
| SRR9715739 | Root | 1337.225 |
| SRR9715742 | Root | 1360.401 |
| SRR9715743 | Root | 1354.325 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 489.024 |
| SRR8749028 | MeJA induced 9h | 362.981 |
| SRR8749029 | MeJA induced 9h | 464.613 |
| SRR8749030 | Uninduced | 412.917 |
| SRR8749031 | Uninduced | 200.403 |
| SRR8749032 | Uninduced | 689.336 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 256.477 |
| SRR8400027 | Control - Root | 336.540 |