Gene detail information of Glyur000040s00007400 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52115.1 | 8.00E-63 | gamma response gene 1 |
| NR | XP_004510978.1 | 0 | PREDICTED: protein gamma response 1-like [Cicer arietinum] |
| Swissprot | tr|Q9ZRT1|GR1_ARATH | 1.00E-70 | Protein gamma response 1 |
| trEMBL | tr|G7LEG0|G7LEG0_MEDTR | 0 | Gamma response-like protein, putative {ECO:0000313|EMBL:AET02195.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00040 | 464033 | 466492 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000040s00007400.1 | PF08573.5 | SAE2 | 395 | 470 | 2.20E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.106 |
| SRR1783600 | control | 3.092 |
| SRR1783602 | moderate drought stress | 2.847 |
| SRR1811619 | moderate drought stress | 2.920 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.630 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.505 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.682 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.449 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.106 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.905 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.842 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.291 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.084 |
| SRR2868004 | Drought Stress (root) | 5.728 |
| SRR2967015 | Control (root) | 6.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.181 |
| SRR9715740 | Leaf | 19.918 |
| SRR9715741 | Leaf | 16.699 |
| SRR9715739 | Root | 2.293 |
| SRR9715742 | Root | 3.397 |
| SRR9715743 | Root | 3.862 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.992 |
| SRR8749028 | MeJA induced 9h | 5.512 |
| SRR8749029 | MeJA induced 9h | 3.230 |
| SRR8749030 | Uninduced | 1.701 |
| SRR8749031 | Uninduced | 0.540 |
| SRR8749032 | Uninduced | 1.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.377 |
| SRR8400027 | Control - Root | 4.504 |