Gene detail

Gene detail information of Glyur000040s00007389.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G42250.1	4.00E-103	cytochrome P450, family 712, subfamily A, polypeptide 1
NR	KEH19049.1	0	cytochrome P450 family protein [Medicago truncatula]
COG	YP_007090263.1	2.00E-26	cytochrome P450 [Chroococcidiopsis thermalis PCC 7203]
Swissprot	tr\|Q42798\|C93A1_SOYBN	1.00E-134	3,9-dihydroxypterocarpan 6A-monooxygenase
trEMBL	tr\|A0A072TNG7\|A0A072TNG7_MEDTR	0	Cytochrome P450 family protein {ECO:0000313\|EMBL:KEH19049.1}

Sequence

Transcript Sequence

>Glyur000040s00007389.1
AAAAAAAAAGGTAAGAGTCACATCCTATCCTATTAGTAGTGAGGAAAAGCACAAGGACCAAAGTGTTAACCAAGCACCATGACAGAGACACTCCTATCGTTACTGCTACTACTACTACTACTTATCTCACCCTTCATCCTAGTCCTATCTTACATTATCATCTCCTCAACCGTCAAACCCACCGCCACCGTTCTCCGCCTTCCACCGAGCCCACCATGTATCCTNCCTATAATAGGGCACCTCCACCTCCTCACTCCATCCCTATACAAATCCCTCCAATCCCTCTCCTCAAAGCACGGCCCTNTCCTCCTCCTCCGTCTCGGCCCCTCCCGCCGCCGCCTCGTCGTCGTCTCCTCCTCCTCCGTCGCCGCCGCCGTCTTCAAAACCCACGACCTCGCCTTCTCATCCCGACCGGCGTTCGCATTCGCCGATAGGCTCCCTTACGGCACCTCCGGGTTCATAACCGCCCCTTACGGCCCTTACTGGCGATTCATGAAGAAGCTCTGCGTGACGGAACTGCTCAACACGCGCCAGATGGAGCGGTCGAAAAGGATAAGAAAGGATGAAGTTGAGCGTTCGGTGAAAAGGGTGTTGGAGAGTGCGAGGGACAATGCTGCACTTGATTTGGGCGCTGAGCTCATGAGGCTCACCAACAACGTCACTTGCAGAATGGCCATGAGCACCAGGTGTTCGGAGAACTGCGAGGATGCTGAGAGGATCAGGAAGTTGGTGAAGGAGTCCTTTGAGCTTGCTGCCATGTTGTGCTTTGGGGATGTGTTGGGCCCTCTCAAGNAGTTGAGTTTCTGGGTTTATGGGAAGAAGGCCAAGGATGTGAGCAGGAGGTATGATGAGTTGTTGGAGAAGGTGCTGAAGGAGCATGAAGCCAAGAGATCATCATCAAGTAGTGGGCATGGAGATGGAGGTGATCATAAGGGTGAGAGGGATTTAATGGACATTCTGTTGGACGTTTATCATGATGCTCATGCAGAGTTCAAGATCACAAGGACCCATATCAAAGCCTTCTTTATGGCACAGACACCTCAGCAGAAGCCATGCAATGGGCAATGGGCAATGGCTGAGCTCCTCAACCATCCAGAAGCATTCCATAAGGTAAGAAAGGAGATAGAATCAGTCACTGGAAATGTTAGGCTAGTGGAAGAATCAGACATCCCAAACCTGCCATATTTGCAAGCAGTTGTGAAGGAAACACTGAGACTCCACCCACCAGGACCAGTAACCACAAGAGAATGCATCCAAGACTGCAAAATAAGTGGCTTTGATATACCAGCAAAAACAGCAGTGGCAATCAATTTATATGCCATAATGAGGGACCCAGAAATTTGGGAGGACCCGAATGAATTCCATCCTGAAAGGTTCTTGGTCTGTTTGAAAGGACAAGAGGGTGATGATGCTAAAAGAATGGACTTTGATTTTGTTCCATTTGGGGCAGGGAGGAGAGGGTGCCCAGGGACAACACTGGCATTCAAATTGATGAACACTGCAGTTGCTGCTATGGTGCAGTGCTTTGATTGGAAGATTGGTGAAGATGGGAAAGGAGATAAGGTTGATATGCAATCTGGATCTGGCATGTCTTTGAGCATGCTTCACCCACTAATTTGTCTTCCTCTAGTANATTTTAACCCCATAAATGATAATGAATAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00040	395319	397769	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP712A1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000040s00007389.1	PF00067.17	p450	43	500	7.80E-83

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	9.907
SRR1783600	control	9.802
SRR1783602	moderate drought stress	8.592
SRR1811619	moderate drought stress	8.195

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.713
DRR006520	Root Summer glycyrrhizin high producing strain	3.663
DRR006521	Root Winter glycyrrhizin high producing strain	1.775
DRR006522	Root Winter glycyrrhizin high producing strain	1.634
DRR006523	Root Summer glycyrrhizin low producing strain	6.306
DRR006524	Root Summer glycyrrhizin low producing strain	6.698
DRR006525	Leaf Summer glycyrrhizin high producing strain	17.618
DRR006526	Leaf Summer glycyrrhizin high producing strain	17.258

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.948
SRR2868004	Drought Stress (root)	2.126
SRR2967015	Control (root)	2.761

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.487
SRR9715740	Leaf	5.307
SRR9715741	Leaf	4.287
SRR9715739	Root	0.791
SRR9715742	Root	1.116
SRR9715743	Root	0.623

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.716
SRR8749028	MeJA induced 9h	0.439
SRR8749029	MeJA induced 9h	0.501
SRR8749030	Uninduced	0.146
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.151

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.053
SRR8400027	Control - Root	2.805