Gene detail information of Glyur000040s00007375 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17220.1 | 3.00E-22 | Protein kinase superfamily protein |
| NR | ACU22971.1 | 5.74E-31 | unknown [Glycine max] |
| Swissprot | tr|O49839|APK2A_ARATH | 7.00E-17 | Protein kinase 2A, chloroplastic (Precursor) |
| trEMBL | tr|C6TJ81|C6TJ81_SOYBN | 2.00E-31 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU22971.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00040 | 306187 | 307654 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 5.401 |
| SRR1811619 | moderate drought stress | 6.757 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.085 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.265 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.087 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.007 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.118 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 2.211 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 3.478 |
| SRR9715743 | Root | 2.088 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.325 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.058 |
| SRR8400027 | Control - Root | 4.029 |