Gene detail

Gene detail information of Glyur000040s00007357

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G45510.1	2.00E-132	cytochrome P450, family 704, subfamily A, polypeptide 2
NR	XP_004510930.1	0	PREDICTED: cytochrome P450 704C1-like [Cicer arietinum]
COG	YP_004174517.1	6.00E-35	cytochrome P450 [Anaerolinea thermophila UNI-1]
Swissprot	tr\|Q50EK3\|C04C1_PINTA	5.00E-165	Cytochrome P450 704C1
trEMBL	tr\|I1KIM7\|I1KIM7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G09160.1}

Sequence

Transcript Sequence

>Glyur000040s00007357.1
ACTTTTAACTGCCACAACATAGCATCAACTTCTTCCCTAAGCCCACCTTTGCCATCCATGGATTTTCTTTCAAATCCTTACCTCATTGCAGCTTCATCTGCAGCTTTAACCCTTCTGATGGTTCCATTTCTGTTCAGAAAATTGAACAAAAGCCGCGAAAGGAAGAAGTACCATCCAGTTGCTGGCACCATGTTTAATCAGATGCTGAACTTCAATAGGCTGCACCATTACATGACCGATCTTGCAGGGAGGTACAAGACATACAGGTTGCTCAACCCTTTCAGAAATGAAGTTTACACTGCAGAACCCAGTAATGTTGAGTATATACTCAAAACCAATTTTCAGAATTATGGAAAGGGGTTGTACAACTACAACAATTTGAAGGATTTACTAGGTGATGGGATCTTCACTGTTGATGGTGAGAAATGGCGTGAACAAAGGAAGTTATCAAGTCATGAATTCTCCACCAAGATGTTAAGGGAATTCAGCACTTTCATATTCAGAAAGAATGCAGCAAAGGTTGCAGATATAGTGTCTCAAGCTGCAACAAATAACAATACATTGGAAATCCAAGTGATTGCATTTGGAACNGAACTTGACACCATNTGTGGATCAAATGAAGAAGGGAAGAAGTTTGCTGATGCTTTTGATACTGCAAGTGCATTAACCCTTTATCGTTATGTTGATGTCTTCTGGAAGCTAAAGAAATTTCTGAATATTGGATCAGAGGCCAGATTAAGAAAGAATACTGAAATTTTAAATGAATTCGTCTTGAAACTAATCAACACTAGAACTCAGCAAATGCAGATTTCAAAGGATGATTCTGTTAGCAAACGAGGGGATATTCTGTCAAGGTTTTTGCAAGTGAAGGGATATGAGTCAACATACTTGCGAGATATAATTCTAAACTTTGTTATTGCCGGCAGAGACACAACGGCTACCACACTTTCTTGGTTCATGTACATGCTATGCAAGTATCCAGCAGTACAAGAAAAAGCTGCAAAAGAAGTGAAAGAAGCAACAAACACAAAAACAATTAGTAGCTGCACTGAGTTTGCGTCGCGTGTAACAGAAGAAGCTCTTGAAAAGATGAATTATCTCCATGCTGCAATTACAGAAACTCTCAGACTTTATCCTGCAGTTGCCGTTATTGCAAGTCTCAAGACTCCTTTCATGCAGGATGCAAAGATATGCTTTTCTGATGACACATTACCAGATGGGTATAGTGTGAGTAAAGGAGACATGGTAAGTTACCAACCTTATGCAATGGGGCGGATGAAATTCATATGGGGTGANGATGCAGAGGAATTTAGACCTGAAAGNTGGCTTGATGAGAATGGCATTTTTCAGCCTGNGAGCCCTTTCAAGTTTACAGCTTTTCAGGCAGGACCTCGGATTTGTCTAGGAAAGGAGTTTGCTTATAGACAGATGAAGATATTATCAGCAGTTTTATTAGGCTGTTTCCGTTTCAAATTGAATGATGAGAAGAAAAATGTCACTTATAGAACGATGCTAACTCTTCATATCGATGGAGGACTTGAAATCAAAGCCTTACACCGGGATTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00040	196916	199686	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP704A2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000040s00007357.1	PF00067.17	p450	39	489	2.80E-62

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.000
SRR1783600	control	0.986
SRR1783602	moderate drought stress	1.481
SRR1811619	moderate drought stress	1.344

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.267
DRR006520	Root Summer glycyrrhizin high producing strain	1.180
DRR006521	Root Winter glycyrrhizin high producing strain	2.051
DRR006522	Root Winter glycyrrhizin high producing strain	1.937
DRR006523	Root Summer glycyrrhizin low producing strain	1.951
DRR006524	Root Summer glycyrrhizin low producing strain	1.485
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.926
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.220

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.228
SRR2868004	Drought Stress (root)	2.960
SRR2967015	Control (root)	2.743

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	7.589
SRR9715740	Leaf	6.204
SRR9715741	Leaf	5.831
SRR9715739	Root	0.155
SRR9715742	Root	0.538
SRR9715743	Root	0.554

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.474
SRR8749028	MeJA induced 9h	2.441
SRR8749029	MeJA induced 9h	0.943
SRR8749030	Uninduced	1.170
SRR8749031	Uninduced	0.500
SRR8749032	Uninduced	0.287

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.573
SRR8400027	Control - Root	2.598