Gene detail

Gene detail information of Glyur000040s00007356.2

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G45510.1	4.00E-171	cytochrome P450, family 704, subfamily A, polypeptide 2
NR	XP_008232728.1	0	PREDICTED: uncharacterized protein LOC103331840 [Prunus mume]
COG	NP_241445.1	3.00E-39	cytochrome P450 hydroxylase [Bacillus halodurans C-125]
Swissprot	tr\|Q50EK3\|C04C1_PINTA	1.00E-168	Cytochrome P450 704C1
trEMBL	tr\|I1KIM7\|I1KIM7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G09160.1}

Sequence

Transcript Sequence

>Glyur000040s00007356.2
ATGGAATTTTTGTTCACCCTGTTGACTTTCATAGCCTTCACTTTTCTGGGTCTCTTCATGGCCTTGTGTTTCATCATGATGATGACCATCTTCATGGGAAAATCCATATGGGACCCAGAATACGCACCAGTGAAAGGCACAGTGTTCCACCAGCTATTCTACTTCAAAGAACTCCATGACTACCATGCTCAATTGGCCAAATCTCATCCAACTTTCCGGCTTCTTGCACCAGATCAAAGCGAGTTGTACACCGTAGACACACGAAATGTTGAACACGTGCTGAAAACCAACTTTGACAAGTACTCCAAAGGCAAGTATAACCAGGATGTTATCACTGATCTCTTTGGTGAGGGGATTTTTGCTGTTGATGGTGACAAGTGGAGGCAGCAGAGGAAGGTTGCAAGCTATGAATTCTCCACAAGGGTTCTTAGAGATTTCAGTTGCTCTGTGTTTAGAAGGAATGCTGCNAAGTTGGTCAGAGTGGTTATGTCAGAATTTTCACATCAGGGTCTGGTTTTTGATATGCAAGAGTTACTAATGAGAAGCGCTCTGGACTCCATATTCAAAGTTGGGTTTGGAACAGAATTGAATTGCTTAGAGGGATCAACCAAAGAGGGAACTGAATTCATGAAGGCCTTTGATGAATCAAATGCTTTAATTTACTGGCGCTATGTTGATCCATTCTGGAGGCTCAAGAGGTTTCTTAATATNGGTAATGAAGCTACCCTTAAACGCAATGTGAAATTAATAGATGATTTCGTCCATGCAGTAATTAAGACCAAAAAAGCACAATTGGCAGTTCAGCAAGATTCTAATGTTAAAGGGGACATACTATCAAGGTTTTTGGTGGAGAGCAAGAAGGACCAAACAACTATGACTGATCAGTATTTGAGGGATATAATTTTGAACTTCATGATAGCTGGAAAAGACTCAAGCGCAAACACTCTCTCATGGTTCTTCTACATGCTCTGCAAGAACCCTCTTGTAGAGGAAAAGATTGTGCAAGAAGTGAGAGATGTCACATGTAGCCATGAAAGTGAGCCCANCATCGATGAGTTTGTCTCCAATTTAACCGATGCCACCCTTGATAAAATGCATTATCTTCATGCAGCATTGACAGAGACCTTGAGATTGTACCCTGCAGTCCCTGTGGATGGAAGGACTGCAGAAGCACATGATGTTCTTCCTGATGGCCACAAACTGAAAAAGGGTGATGGAGTGTACTACTTGGCCTATGGTATGGGTCGAATGTCTTCCATCTGGGGTGAAGATGCTGAGGAATTTCGCCCTGAAAGATGGCTCAAAGATGGGATTTTCCAACCCGAATCTCCATTCAAATTCGTATCTTTCCATGTTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00040	191730	214598	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP704A2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000040s00007356.2	PF00067.17	p450	50	450	1.50E-59

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.383
SRR1783600	control	5.089
SRR1783602	moderate drought stress	6.114
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.780
DRR006520	Root Summer glycyrrhizin high producing strain	0.239
DRR006521	Root Winter glycyrrhizin high producing strain	2.679
DRR006522	Root Winter glycyrrhizin high producing strain	0.079
DRR006523	Root Summer glycyrrhizin low producing strain	3.208
DRR006524	Root Summer glycyrrhizin low producing strain	3.396
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.428
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.398

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.212
SRR2868004	Drought Stress (root)	1.824
SRR2967015	Control (root)	3.327

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.000
SRR9715740	Leaf	2.587
SRR9715741	Leaf	3.345
SRR9715739	Root	5.481
SRR9715742	Root	2.871
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.059
SRR8749028	MeJA induced 9h	0.123
SRR8749029	MeJA induced 9h	8.160
SRR8749030	Uninduced	7.958
SRR8749031	Uninduced	8.125
SRR8749032	Uninduced	5.337

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.078
SRR8400027	Control - Root	3.323