Gene detail information of Glyur000039s00004253 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G55240.1 | 4.00E-29 | Plant protein 1589 of unknown function |
| NR | XP_002523034.1 | 3.65E-52 | conserved hypothetical protein [Ricinus communis] |
| trEMBL | tr|B9SAL5|B9SAL5_RICCO | 1.00E-52 | Putative uncharacterized protein {ECO:0000313|EMBL:EEF39338.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00039 | 475462 | 477471 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000039s00004253.1 | PF09713.5 | A_thal_3526 | 26 | 77 | 6.10E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.299 |
| SRR1783600 | control | 0.264 |
| SRR1783602 | moderate drought stress | 0.078 |
| SRR1811619 | moderate drought stress | 0.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.113 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.112 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.112 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 35.979 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 35.906 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.116 |
| SRR9715740 | Leaf | 3.391 |
| SRR9715741 | Leaf | 20.183 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.188 |
| SRR9715743 | Root | 0.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.313 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.495 |