Gene detail information of Glyur000039s00004249 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39435.1 | 6.00E-29 | Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related |
| NR | XP_007139280.1 | 0 | hypothetical protein PHAVU_008G016000g [Phaseolus vulgaris] |
| trEMBL | tr|V7B482|V7B482_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW11276.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00039 | 465527 | 469132 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000039s00004249.1 | PF14309.1 | DUF4378 | 613 | 765 | 4.40E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.318 |
| SRR1783600 | control | 5.356 |
| SRR1783602 | moderate drought stress | 3.763 |
| SRR1811619 | moderate drought stress | 3.722 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.557 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.527 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.829 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.854 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.345 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.147 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.098 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.088 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.762 |
| SRR2868004 | Drought Stress (root) | 23.602 |
| SRR2967015 | Control (root) | 23.007 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.222 |
| SRR9715740 | Leaf | 3.176 |
| SRR9715741 | Leaf | 5.500 |
| SRR9715739 | Root | 1.598 |
| SRR9715742 | Root | 8.393 |
| SRR9715743 | Root | 6.818 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.813 |
| SRR8749028 | MeJA induced 9h | 4.251 |
| SRR8749029 | MeJA induced 9h | 7.009 |
| SRR8749030 | Uninduced | 5.944 |
| SRR8749031 | Uninduced | 11.731 |
| SRR8749032 | Uninduced | 11.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.942 |
| SRR8400027 | Control - Root | 19.998 |