Gene detail information of Glyur000039s00004247 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G11890.1 | 2.00E-46 | adenylate cyclases |
| NR | XP_003552665.1 | 2.56E-117 | PREDICTED: uncharacterized protein LOC100818552 [Glycine max] |
| Swissprot | tr|Q9SIY3|TTM3_ARATH | 1.00E-56 | Triphosphate tunel metalloenzyme 3 |
| trEMBL | tr|I1N516|I1N516_SOYBN | 1.00E-117 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G52200.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00039 | 460003 | 460608 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000039s00004247.1 | PF01928.16 | CYTH | 2 | 182 | 3.90E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.182 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.183 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.798 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.328 |
| SRR2868004 | Drought Stress (root) | 0.351 |
| SRR2967015 | Control (root) | 0.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.482 |
| SRR9715740 | Leaf | 37.471 |
| SRR9715741 | Leaf | 18.682 |
| SRR9715739 | Root | 0.362 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.523 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.094 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.111 |
| SRR8400027 | Control - Root | 0.141 |