Gene detail

Gene detail information of Glyur000039s00004243

Functional Annotation

Database	Orthologs	E value	Annotation
NR	XP_004492068.1	3.57E-93	PREDICTED: BAG family molecular chaperone regulator 6-like [Cicer arietinum]
Swissprot	tr\|O65373\|BAG5_ARATH	3.00E-13	BAG family molecular chaperone regulator 5, mitochondrial (Precursor)
trEMBL	tr\|G7KVN1\|G7KVN1_MEDTR	9.00E-91	BAG domain protein {ECO:0000313\|EMBL:AES77998.1}

Sequence

Transcript Sequence

>Glyur000039s00004243.1
ATGTACGGAACCCAGTGGGGCCAACGTTACAACAAGGCACCGTCGAAGGTGGTTACGATACCGGTGCACTTTGTGGGGTCAGAGCGAAGCAGGAGCGAGTCGGCGAGGAGGATTCAGAGGGTGGCGAGAGGGTATCTGGTGAGGAAGAGCGTGAAGAAGATGGTGGCGATGAGGGTGGAGTTGGAGGGGATCGAGAAGAAGGTGGTGAGTGACCCGGAAACGGTGGAGGCGATTCGGAGGGAGGAAAAGGAGAGGGTGAGGGTGGGAGAGAGCATCATGAGCTTGCTCCTCAGGTTGGACTCTGTTAGAGCCTTAGACTGCTCTGCCCTCAGGGACTTGAGGAAGTCCCTCATCAAGAGAGCCATTGCCCTTCAAGAACTTGTCGATCAATTGGTGTCTGTGGGTCCCACTCATCATCATGTTGCTGCTGCTGAGGTGGAAGATGGGGAAGCTGAGAAAATGGAAGCTTTGAGGAATGAAGAGAACANGGAGGAGGATGGTGGGGGTAAGTGTGTGGGGGAAGAGAGCGTTGGGACTAGTTTGGTTAAGGAGAATTCTTTGGTGAAGGAAGAGGAGGGTCAAGACATTAGGGGTGAGGAGCATGAGGAAGGTAACAAGATGGAAGCTNTGGGGGGTAGTGAGGAGAATTGTTTGGAGAAGGAAGAGGAGGAGGGTCAAGTTGGAATGCGTGAGGAACATGGGGAAGCTGAGAAAATGGAAACTTTGAGGAATGAGAAGAAGATGGAGAAGGTACAAGAGAAGGAGGGTGGTGAGGGAAAATGTGTGTGGGGAGGTGAGGAGCTTGAGGAAGGTGAGAAAATGGAAGCTTTGGTGGATAGTGAAGTTGGAATTTGTGCGGGAGAAGAGAGTGTGGGAACGAGTTTGGTGGAGGAGGAGGAGGAGGAGGAGGATTGTGTGGTGAAAGAAGAGGAGGGTGGAATTGGAATTGCGTGTGAGGAGGAGGAGGAGGAGGAGGAGGAGAATTGTAAGGGTGGTGGGAATAGGGAGTTGTTGGAAAGGATGGTGGAGGACAATGAGAAGATGATGGAGATGATGGCGCAGCTGTTTGAGAGGAATGAGATGCAGACTAGACTCCTTACCTCCCTCACTCAAAGGGTAGAGCAGCTGGAGAGGGCATTTTCCTGTGTCAAGTTGAGGANGAAGAACAAGAAGAGGAGAGATGTCCATGTCAGACACAAACAACAAACTGACCCCAAAAACGGTTGCACCTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00039	446263	447495	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0005515 protein binding

GO:0051087 chaperone binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000039s00004243.1	PF02179.11	BAG	62	131	9.70E-08

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.492
SRR1783600	control	0.555
SRR1783602	moderate drought stress	1.805
SRR1811619	moderate drought stress	1.997

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.838
DRR006520	Root Summer glycyrrhizin high producing strain	6.952
DRR006521	Root Winter glycyrrhizin high producing strain	5.779
DRR006522	Root Winter glycyrrhizin high producing strain	5.380
DRR006523	Root Summer glycyrrhizin low producing strain	3.116
DRR006524	Root Summer glycyrrhizin low producing strain	3.158
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.075
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.075

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.902
SRR2868004	Drought Stress (root)	5.046
SRR2967015	Control (root)	0.923

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.622
SRR9715740	Leaf	0.489
SRR9715741	Leaf	0.714
SRR9715739	Root	0.054
SRR9715742	Root	2.935
SRR9715743	Root	2.399

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.465
SRR8749028	MeJA induced 9h	0.716
SRR8749029	MeJA induced 9h	0.605
SRR8749030	Uninduced	0.787
SRR8749031	Uninduced	0.681
SRR8749032	Uninduced	4.943

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.709
SRR8400027	Control - Root	6.776