Gene detail

Gene detail information of Glyur000039s00004238

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G13100.1	2.00E-130
NR	XP_004492061.1	0	PREDICTED: uncharacterized protein LOC101497365 [Cicer arietinum]
trEMBL	tr\|V7B493\|V7B493_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW11286.1}

Sequence

Transcript Sequence

>Glyur000039s00004238.1
GTTCACATTTATCCACGTGTCTAATTCTCCCGCTCCGTCCATCTATCCGTTAACCCTACTCTCTCTCTCTCTCTCTCCTGCAACTCCTCCGCCATTGAACACACAAGCACAAACCGAAATTCATTCTTCTTTTTCCAAATAAACGAAAAAAAATAGAAAAAAAGGAGAAAAGAGTAAATACACACATTCATTCTTCGCAATGGGGAAGCTTCTCTGCGATTCAACCACCGTCGCCGAACCATTCCAAGGTTCGCCGGTGGCGGCGCTTCCTTGGAGGGATACGCCATCGCCGTCGCCGATGGAGGCCATCGGAGCCGTAGATCTCGGCCTTCCGGCTAACGTCTCCGGCGGCTGGGAGGACGTCGTCGGCCTGGAGGAGCAGCAGCGGCGCCACCTCCAGAGGCTCCACGCCAAGGGAGTGCTCTGGAAGCCGCCGGAGAAGGAGGATGACTCATCGTCGTCGTCTCCGTCGTCCTCCGATCTCAGATCCGTCGTCTTCCGCCTCTCTCACGGCGGTGAGGTATCCTCCGACGGGAACTGCCTCTTCACGGCGTCGCGGAAGGCAATGGGCGGAGAGGACCTCGACGCGCGGGAGCTGAGGCGGAGGACGGTGGCGAGGTTCTTGGCGGATTTTGGATCTGCGAGTTTCGACGAGAGGGAAGGGATCGACGACGCGATTCGGCACATGTACTCGCCGGATCTGAAGAACGGTTGGGGTATTCACGTGGTTCAGGAGGTGAAGTTGTTGGCCAAGAAGGAGGATCGATTCGCTCTTGATTCGGCCATCGACGAGCTCGTTCACCTCGGCATGCAAAGAGAACTGGCAGCGGAGTCTATTTACAGAGAGAGATGTGTTCCCGTGAATGATGGTCCATCTTGGGCTAAATACATGTTGACCTCTGGTTCTCCTGATGATGACTATGATATCATCACATTGCAATATACTGAGGAGGGTTTATTATCTGTAGATGAGAACAGGGAGGGTCGCGCCGCAGCTTTCGGAGATGATATCGCAATTGAGTGTCTTGCTACAGAGTTCAAGCGAGAGATTTATGTGGTGCAAGCGCATGGTTCAGATGCTATGGTTGATGAAGAAAATTGTGTTTTCTTCCTTCCACATCGTCCAAGGAGTGAAATTACCGAACTTCCCTTCTTCCTTTTCATGAAAGGAACAGGTTGGTGTGGTGCTGGAGCTGATCACTATGAGCCCCTGATTGCTCATCCTTGCGCCCTTGTTTCCCAAGAAAAGGTTGCTGTGGTACTGTGACTGTGAGACCCAGCCTTCAATTTTGTGGAGTAGAGATTGAGTAGAATTAGAATTTCTTCACCCTATTTATGGCCACTCTTAAAAGTTTCTGGCCCTGCAATCTGGTTCTCCTTAACACTGATTTTGGTCCCAAGGAGAATCTCATTGTGTAGCAGCATTTCTCAAAAGTTTCTGGCCCTGCAATCTGGTTCTCCCTAATACTGAATTTGGTCCCCAAGGAGAATCTCATTGTGTAGCATTTATTTTGTTGCTGACATTTAGAATCAATCGTCTTTGACTCTCCTGACATTTGACAAAGCAGGTTTGCCTGCAGTTTGTGCAACCGTAGAGTATTGTAATAGTTTCACCGGCTTCTGTTTTTTTTTCTTCCGGTTATTGAGTTGATTTAGAGGGTTTATGCCGTCTAGGTAGTGTGTTGTTCAAATTGGAAGAGTTNTATCTCAGTGGATTTCGTCACATTAATGAAGTGGCTTCTTTTCTGGGCTTTTCTCTCTGTCATTTTACATTGCATTTCAAACCGTGATATGTTAAATATCCAGTTTCATGGTGGTAAGTGCGAGATGCTGATTCATTGTTCGTGTGCTTCTGCTATTGTTTTAATCTTTGAATAATCGTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00039	420439	423826	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000039s00004238.1	PF02338.14	OTU	110	300	1.70E-05

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	26.173
SRR1783600	control	26.180
SRR1783602	moderate drought stress	15.403
SRR1811619	moderate drought stress	15.203

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	16.218
DRR006520	Root Summer glycyrrhizin high producing strain	16.117
DRR006521	Root Winter glycyrrhizin high producing strain	9.671
DRR006522	Root Winter glycyrrhizin high producing strain	9.730
DRR006523	Root Summer glycyrrhizin low producing strain	9.985
DRR006524	Root Summer glycyrrhizin low producing strain	9.958
DRR006525	Leaf Summer glycyrrhizin high producing strain	10.660
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.441

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	50.704
SRR2868004	Drought Stress (root)	33.578
SRR2967015	Control (root)	29.911

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	22.238
SRR9715740	Leaf	20.048
SRR9715741	Leaf	22.202
SRR9715739	Root	29.359
SRR9715742	Root	27.683
SRR9715743	Root	28.741

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	66.480
SRR8749028	MeJA induced 9h	15.795
SRR8749029	MeJA induced 9h	22.615
SRR8749030	Uninduced	11.184
SRR8749031	Uninduced	11.579
SRR8749032	Uninduced	12.742

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	37.222
SRR8400027	Control - Root	38.364