Gene detail information of Glyur000039s00004217 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G05840.1 | 0 | Eukaryotic aspartyl protease family protein |
| NR | XP_004492042.1 | 0 | PREDICTED: aspartic proteinase-like protein 2-like [Cicer arietinum] |
| Swissprot | tr|Q9S9K4|ASPL2_ARATH | 3.00E-143 | Aspartic proteinase-like protein 2 (Precursor) |
| trEMBL | tr|I1N4Z1|I1N4Z1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G51920.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00039 | 309061 | 315566 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000039s00004217.1 | PF14543.1 | TAXi_N | 94 | 268 | 3.90E-32 |
| Glyur000039s00004217.1 | PF14541.1 | TAXi_C | 296 | 448 | 1.50E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.199 |
| SRR1783600 | control | 14.051 |
| SRR1783602 | moderate drought stress | 15.898 |
| SRR1811619 | moderate drought stress | 15.850 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.254 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.262 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 46.565 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 45.359 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.849 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.265 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.771 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.783 |
| SRR2868004 | Drought Stress (root) | 23.117 |
| SRR2967015 | Control (root) | 22.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.501 |
| SRR9715740 | Leaf | 20.234 |
| SRR9715741 | Leaf | 26.066 |
| SRR9715739 | Root | 2.957 |
| SRR9715742 | Root | 8.631 |
| SRR9715743 | Root | 8.256 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 64.352 |
| SRR8749028 | MeJA induced 9h | 34.906 |
| SRR8749029 | MeJA induced 9h | 56.082 |
| SRR8749030 | Uninduced | 31.979 |
| SRR8749031 | Uninduced | 72.847 |
| SRR8749032 | Uninduced | 50.475 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.557 |
| SRR8400027 | Control - Root | 14.503 |