Gene detail information of Glyur000039s00004197 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G16030.1 | 1.00E-53 | |
| NR | KEH21810.1 | 2.61E-158 | LuxR family transcriptional regulator, putative [Medicago truncatula] |
| trEMBL | tr|A0A072U7J6|A0A072U7J6_MEDTR | 1.00E-158 | LuxR family transcriptional regulator, putative {ECO:0000313|EMBL:KEH21810.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00039 | 143799 | 148224 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.707 |
| SRR1783600 | control | 0.763 |
| SRR1783602 | moderate drought stress | 0.075 |
| SRR1811619 | moderate drought stress | 0.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.321 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.255 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.802 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.615 |
| SRR2868004 | Drought Stress (root) | 0.990 |
| SRR2967015 | Control (root) | 0.435 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.518 |
| SRR9715740 | Leaf | 1.751 |
| SRR9715741 | Leaf | 2.967 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.054 |
| SRR9715743 | Root | 0.179 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.068 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.045 |
| SRR8749032 | Uninduced | 0.010 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.799 |
| SRR8400027 | Control - Root | 1.307 |