Gene detail information of Glyur000039s00004187 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44820.2 | 1.00E-19 | |
| NR | XP_003517596.1 | 4.44E-86 | PREDICTED: uncharacterized protein LOC100819044 [Glycine max] |
| trEMBL | tr|I1J561|I1J561_SOYBN | 2.00E-86 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G03380.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00039 | 55265 | 57348 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000039s00004187.1 | PF15375.1 | DUF4602 | 71 | 172 | 1.10E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.999 |
| SRR1783600 | control | 17.605 |
| SRR1783602 | moderate drought stress | 18.900 |
| SRR1811619 | moderate drought stress | 18.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 37.995 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 37.428 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 30.182 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 29.307 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 40.111 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.653 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.588 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 51.204 |
| SRR2868004 | Drought Stress (root) | 50.732 |
| SRR2967015 | Control (root) | 46.899 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.500 |
| SRR9715740 | Leaf | 29.825 |
| SRR9715741 | Leaf | 35.437 |
| SRR9715739 | Root | 4.184 |
| SRR9715742 | Root | 14.004 |
| SRR9715743 | Root | 13.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 96.102 |
| SRR8749028 | MeJA induced 9h | 63.124 |
| SRR8749029 | MeJA induced 9h | 75.488 |
| SRR8749030 | Uninduced | 62.386 |
| SRR8749031 | Uninduced | 46.973 |
| SRR8749032 | Uninduced | 34.977 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 51.982 |
| SRR8400027 | Control - Root | 42.551 |