Gene detail information of Glyur000038s00004517 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50790.1 | 8.00E-75 | Nodulin MtN3 family protein |
| NR | XP_007137870.1 | 1.21E-134 | hypothetical protein PHAVU_009G162700g [Phaseolus vulgaris] |
| Swissprot | tr|Q9LUE3|SWT10_ARATH | 1.00E-91 | Bidirectional sugar transporter SWEET10 |
| trEMBL | tr|V7AWB5|V7AWB5_PHAVU | 5.00E-135 | Sugar transporter SWEET {ECO:0000256|RuleBase:RU910715} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00038 | 510358 | 513270 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000038s00004517.1 | PF03083.11 | MtN3_slv | 30 | 113 | 1.50E-26 |
| Glyur000038s00004517.1 | PF03083.11 | MtN3_slv | 149 | 233 | 4.60E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.894 |
| SRR1783600 | control | 1.027 |
| SRR1783602 | moderate drought stress | 13.698 |
| SRR1811619 | moderate drought stress | 13.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.316 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.149 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.253 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.247 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.063 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.676 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.803 |
| SRR2868004 | Drought Stress (root) | 14.354 |
| SRR2967015 | Control (root) | 23.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.076 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 1.125 |
| SRR9715742 | Root | 3.618 |
| SRR9715743 | Root | 2.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.103 |
| SRR8400027 | Control - Root | 6.181 |