Gene detail information of Glyur000038s00004513 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50760.1 | 5.00E-20 | SAUR-like auxin-responsive protein family |
| NR | XP_003523159.1 | 4.32E-48 | PREDICTED: uncharacterized protein LOC100789525 [Glycine max] |
| trEMBL | tr|I1JXM5|I1JXM5_SOYBN | 2.00E-48 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G37480.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00038 | 484689 | 485204 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000038s00004513.1 | PF02519.9 | Auxin_inducible | 35 | 115 | 1.80E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.202 |
| SRR2868004 | Drought Stress (root) | 1.456 |
| SRR2967015 | Control (root) | 0.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.118 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 1.365 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.723 |
| SRR8749028 | MeJA induced 9h | 4.085 |
| SRR8749029 | MeJA induced 9h | 0.833 |
| SRR8749030 | Uninduced | 3.226 |
| SRR8749031 | Uninduced | 2.662 |
| SRR8749032 | Uninduced | 4.450 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.618 |
| SRR8400027 | Control - Root | 0.146 |