Gene detail information of Glyur000038s00004495 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G01930.2 | 3.00E-140 | Major facilitator superfamily protein |
| NR | KHN23980.1 | 0 | Putative transporter MCH1 [Glycine soja] |
| COG | NP_069203.1 | 8.00E-10 | oxalate/formate antiporter [Archaeoglobus fulgidus DSM 4304] |
| trEMBL | tr|I1JXK6|I1JXK6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G37320.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00038 | 343959 | 349373 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000038s00004495.1 | PF06813.8 | Nodulin-like | 16 | 263 | 6.50E-85 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.337 |
| SRR1783600 | control | 2.383 |
| SRR1783602 | moderate drought stress | 7.118 |
| SRR1811619 | moderate drought stress | 6.969 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.413 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.168 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.363 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.263 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.878 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.698 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 31.895 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 31.837 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.240 |
| SRR2868004 | Drought Stress (root) | 1.801 |
| SRR2967015 | Control (root) | 4.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.862 |
| SRR9715740 | Leaf | 2.243 |
| SRR9715741 | Leaf | 3.141 |
| SRR9715739 | Root | 1.067 |
| SRR9715742 | Root | 1.355 |
| SRR9715743 | Root | 1.733 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.020 |
| SRR8749029 | MeJA induced 9h | 0.029 |
| SRR8749030 | Uninduced | 0.025 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.496 |
| SRR8400027 | Control - Root | 3.484 |