Gene detail

Database	Orthologs	E value	Annotation
TAIR	AT3G48590.1	2.00E-82	nuclear factor Y, subunit C1
NR	XP_003526954.1	1.54E-122	PREDICTED: nuclear transcription factor Y subunit C-1-like [Glycine max]
Swissprot	tr\|Q9SMP0\|NFYC1_ARATH	4.00E-105	Nuclear transcription factor Y subunit C-1
trEMBL	tr\|I1KC24\|I1KC24_SOYBN	6.00E-123	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G17780.1}

Transcript Sequence

Protein Sequence

Scaffold	Start	End	Strand
Scaffold00038	331694	335318	-

Gene family	subfamily
Transcription Factors Family	NF-YC

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

biological_process
GO:0006355 regulation of transcription, DNA-templated

cellular_component

GO:0005622 intracellular

GO:0016602 CCAAT-binding factor complex

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

GO:0046982 protein heterodimerization activity

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000038s00004491.1	PF00808.18	CBFD_NFYB_HMF	60	123	5.20E-21

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	92.772
DRR006520	Root Summer glycyrrhizin high producing strain	91.967
DRR006521	Root Winter glycyrrhizin high producing strain	71.796
DRR006522	Root Winter glycyrrhizin high producing strain	70.718
DRR006523	Root Summer glycyrrhizin low producing strain	77.870
DRR006524	Root Summer glycyrrhizin low producing strain	85.032
DRR006525	Leaf Summer glycyrrhizin high producing strain	172.643
DRR006526	Leaf Summer glycyrrhizin high producing strain	171.673

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	90.996
SRR8400027	Control - Root	87.292