Gene detail information of Glyur000038s00004490 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_010943763.1 | 2.02E-08 | PREDICTED: uncharacterized protein LOC105061421 [Elaeis guineensis] |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00038 | 327672 | 328070 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 37.819 |
| SRR1783600 | control | 37.205 |
| SRR1783602 | moderate drought stress | 36.894 |
| SRR1811619 | moderate drought stress | 38.154 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.172 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.443 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.910 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.634 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.702 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.428 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 36.595 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 39.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.957 |
| SRR2868004 | Drought Stress (root) | 2.755 |
| SRR2967015 | Control (root) | 1.456 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.277 |
| SRR9715740 | Leaf | 4.098 |
| SRR9715741 | Leaf | 4.111 |
| SRR9715739 | Root | 4.388 |
| SRR9715742 | Root | 7.891 |
| SRR9715743 | Root | 6.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.356 |
| SRR8749028 | MeJA induced 9h | 1.239 |
| SRR8749029 | MeJA induced 9h | 0.610 |
| SRR8749030 | Uninduced | 0.590 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.527 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.029 |
| SRR8400027 | Control - Root | 4.241 |