Gene detail information of Glyur000038s00004483 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G50410.1 | 8.00E-61 | |
| NR | XP_003526958.1 | 4.51E-139 | PREDICTED: uncharacterized protein LOC100820572 isoform X1 [Glycine max] |
| trEMBL | tr|I1KC32|I1KC32_SOYBN | 2.00E-139 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G17850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00038 | 287398 | 291080 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.282 |
| SRR1783600 | control | 10.301 |
| SRR1783602 | moderate drought stress | 9.953 |
| SRR1811619 | moderate drought stress | 9.938 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.505 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.330 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.380 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.945 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.889 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.390 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.200 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.741 |
| SRR2868004 | Drought Stress (root) | 18.527 |
| SRR2967015 | Control (root) | 19.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.550 |
| SRR9715740 | Leaf | 11.753 |
| SRR9715741 | Leaf | 14.629 |
| SRR9715739 | Root | 16.128 |
| SRR9715742 | Root | 22.236 |
| SRR9715743 | Root | 18.523 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.154 |
| SRR8749028 | MeJA induced 9h | 14.718 |
| SRR8749029 | MeJA induced 9h | 12.358 |
| SRR8749030 | Uninduced | 4.747 |
| SRR8749031 | Uninduced | 2.714 |
| SRR8749032 | Uninduced | 7.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.175 |
| SRR8400027 | Control - Root | 32.831 |