Gene detail information of Glyur000038s00004473 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G35210.1 | 7.00E-06 | |
| NR | KHN08956.1 | 5.22E-33 | hypothetical protein glysoja_021778 [Glycine soja] |
| trEMBL | tr|I1K9V4|I1K9V4_SOYBN | 3.00E-33 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G10580.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00038 | 208844 | 209419 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.457 |
| SRR1783600 | control | 0.418 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.881 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 32.209 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.194 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.189 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 48.581 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 50.350 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.793 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.822 |
| SRR2868004 | Drought Stress (root) | 25.891 |
| SRR2967015 | Control (root) | 56.494 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.316 |
| SRR9715740 | Leaf | 17.648 |
| SRR9715741 | Leaf | 23.492 |
| SRR9715739 | Root | 39.266 |
| SRR9715742 | Root | 60.791 |
| SRR9715743 | Root | 52.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 74.173 |
| SRR8749028 | MeJA induced 9h | 117.681 |
| SRR8749029 | MeJA induced 9h | 78.066 |
| SRR8749030 | Uninduced | 332.076 |
| SRR8749031 | Uninduced | 143.497 |
| SRR8749032 | Uninduced | 141.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.466 |
| SRR8400027 | Control - Root | 14.554 |