Gene detail

Gene detail information of Glyur000038s00004441

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G55950.1	5.00E-175	CRINKLY4 related 3
NR	XP_003552952.1	0	PREDICTED: putative serine/threonine-protein kinase-like protein CCR3-like [Glycine max]
COG	YP_001958461.1	8.00E-22	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9LY50\|ACCR3_ARATH	0	Putative serine/threonine-protein kinase-like protein CCR3 (Precursor)
trEMBL	tr\|K7MQ95\|K7MQ95_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G07000.2}

Sequence

Transcript Sequence

>Glyur000038s00004441.1
ATGACACCAACAACGACCCCTTTCACGCTCACACTCGCTCTCTCCCTCGCCGCCATTTTCACCACAACCGCCGTCAACGGCCTCGGCTCAGCCTCCACCACCGCCATCACATACGGCACCACCACCGTCTGCGGCATAGTCGCCGGGGAGCTCAACCAGCGAATCCAATGCTACCGAGGCGGAAAACCCGTTCCGGCGATCCTTCCCAACGTTTCATTCCAGTCCATCTCCGGTGGCCGGAAATTCTTCTGCGGCCTCCGTTTCGGCGGCCTCAGCCTCCACTGTTGGGACACAACAAAGTTGGTGTTTCGACCCAAAAGGCTGTACCACAGTGAAGTGGTGCAGTTGAGTGACGTGGCAGTGGGCGATGATCAAGTTTGTGCCAGAGAGTTGCACTCTGGCGTGGCAAGGTGTTGGAGAGGCGGTGGTGGAACTTCAAAATGGTTTGAATTTGAGTTTCCTTCCCCTGGTGAAAAGTTTCGGTTTCGAAGCATTACTTCGGGGTGTGGTTTTTCCTGTGGGATCTTGAAGGAGAGCAACAGGGTTTGGTGTTGGGGTGAGGGTGGGAAAGGTGGTGAAATTCAGGGACATTTTGGGAATTTGACAATGTTAACATTGGTAGCAGGGGTGTCACATGTTTGTGGATTGACTCTTAATGGGGTTTTGGTTTGTAGAGGGAAAAATGGTTCTGGCCAATTGGGTGTTCCTTTCAGTTCTGCTTCTGTTTTTTCAGGTACTCTTGCTTTGGGAGAAGATTTCACTTGTGCAATTAGGCGCAGAAATGGACTTGTTGTGTGCTGGGGTGGTAGTGGTAGTGATGATGGGATGATAAAGGGTGTTTCTTTTGAGTCAATTGTTGCTGGGTTGGATTTTGTTTGTGGGTTGACCACAAGGAATTTGTCTCTCATTTGTTGGGGAAATGGTTGGTCTAATAATAATAATAAGCTTCATTTTCCTAGTGATGACCTTCCATTGGGTATGATTCTTCCAGGTCCATGTGTTAAGGGTGATGCTTGTAGCTCTTGTGGTATGTATCCAAATTCTGATTTGCTATGTCATGGGTCTGGAAGTATTTGCTATCAATGCCACACTGAGGTTCCACTAGCTGTCCCTGTGCCATTGCTACCACCACCACCTAAGAAACAGTCTTCTTCTTCTGATTCAGATTCAGCTCGTGAAGGGAAAGACTCAAGGGAATTGTTGGCATTTCTGATTGTTGGATCAGTTGGTGCTTTTGCAGGCTTATGCACGGTTCTTTATTTCCTTTGGGTTGGAGCCAGAAGATGCCTAAAGGCAAAAGTTGATAATTCTGTGCAACCAACAAGTANTGAGTCTGATGCTGATGCCTATGTGGATATAGCTCCAATGCCTAATATTGGTTCTATTAATGGAACAACACTAAGATCATCTTTTTCTAGCAAAAGGCATAATAGCTCGAGAGGATTGAGGAGTGGTTCATNATCAAAGCAATTGGACAGGACTGAGAGTTTCACATTGTGTGAACTAGCTGCTGCCACTGACAACTTCTCAGTGGATAATAAGATAGGTGCTGGTAGCTTTGGAAGTGTTTACAAAGGGAAGCTAGGAGATGGTCGTGTAGTGGCCATTAAAAGAGGAGATACTACCAGCAGTACTAAGAAGAAGAAATTCCAGGAGAAAGAAATTGCTTTTGATTCTGAGCTGGCATTGTTGTCCAGGCTTCACCACAGGCATTTGGTGAGGCTAATTGGGTTCTGTGAGGAGAATGAGGAGAGGCTCTTGGTTTATGAGTACATGAGCAATGGTTCAATCCATGATCACTTGCATGGCAAGAACAATGCTGACAAGGGTAGCAGCATTTTGAATTCCTGGAAGATGAGGATCAAAATTGCATTGGATGCTGCAAGGGGAATTGAGTACATTCACAACTATGCAGTGCCACCCATTATCCACAGAGACATAAAGTCCTCAAACATACTTCTGGATTCAAATTGGAATGCCAGAGTTTCTGATTTTGGGCTATCACTAATTTGGCCTGAGACTACTGAGCAAGAGTTGATGTCTACCAGAGCAGTTGGAACTGTTGGGTACATAGACCCTGAGTACTATGTGTTGAACGTGCTAACAACAAAGAGTGATGTGTATGGTTTAGGAGTTGTGTTGTTGGAGCTTCTGACAGGGAAGAGAGCAGTGTTCAAGACTGAAGGTGGGTCAAGTCCTATTGGGGTGGTGGAATATGCAGGGCCAAGGATAGCAGCAGGAGAGCTTTGGGATGTGTTGGATCAAAGGGTTGGAAAGCCAGAGGTGAATGAGGTTGAGCCTCTTGAGATCATGGCTTATACTGCTATGCATTGTGTGAACTTGGAGGGAAAAGAGAGGCCCAACATGACTGATATTGTTGCTAACTTGGAGAGGGCATTGGCTTCTGTTGTGGGCAGCCCTGGTAGTTTCTCTACATCTTCTTCATTCTCTGCCCCTCTTTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00038	31027	33489	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.4.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000038s00004441.1	PF00069.20	Pkinase	510	793	9.70E-45

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.367
SRR1783600	control	3.307
SRR1783602	moderate drought stress	2.256
SRR1811619	moderate drought stress	2.225

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.212
DRR006520	Root Summer glycyrrhizin high producing strain	7.623
DRR006521	Root Winter glycyrrhizin high producing strain	0.579
DRR006522	Root Winter glycyrrhizin high producing strain	0.600
DRR006523	Root Summer glycyrrhizin low producing strain	5.010
DRR006524	Root Summer glycyrrhizin low producing strain	5.085
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.316
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.306

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	12.307
SRR2868004	Drought Stress (root)	8.034
SRR2967015	Control (root)	9.226

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.134
SRR9715740	Leaf	0.027
SRR9715741	Leaf	0.000
SRR9715739	Root	1.887
SRR9715742	Root	4.531
SRR9715743	Root	3.781

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.359
SRR8749028	MeJA induced 9h	0.594
SRR8749029	MeJA induced 9h	0.722
SRR8749030	Uninduced	0.543
SRR8749031	Uninduced	0.093
SRR8749032	Uninduced	0.023

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.065
SRR8400027	Control - Root	7.098