Gene detail information of Glyur000037s00002669 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G20610.1 | 2.00E-137 | Cyclin B2;3 |
| NR | XP_007157988.1 | 0 | hypothetical protein PHAVU_002G115100g [Phaseolus vulgaris] |
| Swissprot | tr|P46277|CCNB1_MEDSV | 0 | G2/mitotic-specific cyclin-1 |
| trEMBL | tr|V7CIF2|V7CIF2_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW29982.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00037 | 474865 | 478271 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000037s00002669.1 | PF00134.18 | Cyclin_N | 186 | 312 | 1.70E-45 |
| Glyur000037s00002669.1 | PF02984.14 | Cyclin_C | 314 | 430 | 1.50E-35 |
| Glyur000037s00002669.2 | PF00134.18 | Cyclin_N | 179 | 305 | 1.70E-45 |
| Glyur000037s00002669.2 | PF02984.14 | Cyclin_C | 307 | 423 | 1.50E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.453 |
| SRR1783600 | control | 2.350 |
| SRR1783602 | moderate drought stress | 1.721 |
| SRR1811619 | moderate drought stress | 1.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.990 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.034 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.063 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.061 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.379 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.380 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.285 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.311 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.021 |
| SRR2868004 | Drought Stress (root) | 10.129 |
| SRR2967015 | Control (root) | 10.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.853 |
| SRR9715740 | Leaf | 0.136 |
| SRR9715741 | Leaf | 1.490 |
| SRR9715739 | Root | 0.945 |
| SRR9715742 | Root | 1.042 |
| SRR9715743 | Root | 1.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 28.248 |
| SRR8749028 | MeJA induced 9h | 23.231 |
| SRR8749029 | MeJA induced 9h | 16.235 |
| SRR8749030 | Uninduced | 0.054 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.419 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.828 |
| SRR8400027 | Control - Root | 10.994 |