Gene detail

Gene detail information of Glyur000037s00002664

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G51460.1	Phosphoinositide phosphatase family protein
NR	XP_004512259.1	PREDICTED: phosphoinositide phosphatase SAC7-like isoform X1 [Cicer arietinum]
Swissprot	tr\|Q9C5G5\|SAC7_ARATH	Phosphoinositide phosphatase SAC7
trEMBL	tr\|G7K028\|G7K028_MEDTR	Phosphoinositide phosphatase SAC1 {ECO:0000313\|EMBL:AES95295.2}

Sequence

Transcript Sequence

>Glyur000037s00002664.1
ATCGAGGCTTCCAAACACGCCCTTACCTTAAAAGTAAAAGGAATATAGCATGCTACAGCTATCATTATTCATTTCCCTTGTCGTTGCAGTCCCACACTTCACGCGCTAAGAGCCCAAAGCTAATTCGAATTTGGATCTTAAATCTTCACCTTGTTCTTCGATCCTGAGAATCAGTGAGCTGGAGTTTCAATAATGATGGAGAGGGCAGATTCTGTTCAGAAGCTGTACACGCGCATGCGACTGTGGGAATTCCCCGAACAGTATGTGATTGAGCCAACGGATGGCTCTTCTGGTTCTTCTCTGGCTGTTAATCGAGTTGATGGCTCCATGAAGCTCATCGATGAGGTTCCAGAATGCAGCTCTCTCCGAGTTCCTAAGATTTATACAATTTTTGGTGTCGTTGGGATGTTGAGGCTTTTGGCTGGATCATATTTGCTGGTTATAACTGAGCGTGAATGTGTTGGATCTTACTTGGGGCATCCAATTTTCAAAATTTCGTCCATGAAGGTTTTTCCATGTAATCATTCGCTTAAAAATACTACTGCNGAACAGAAGAAGACAGAGATGGANTTTTCTGGGCTACTAAATGTTGCTGAGAAAACCTCTGGTCTGTTCTTCTCATANGAAACTAATTTAACTCTGAGTGCACAGCGATTAAATGACCTGGGTGATGAATCTAGATTGCTTCCTCTTTGGAGACAGGCAGAGCCTCGATTTCTATGGAACAATTATATGTTAGAAGTGCTCATAGATAACAAGCTTGACCCATACTTACTCCCTGTAATCCAAGGCAGCTTTCATTACTTTCAAGCAGCCATTGGGAAAGATATTGTTGACGTCACTTTGATTGCTAGGAGATGCACAAGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGCTGATCCTGATGGGTATGTTGCCAATTTTGTGGAAACAGAACAAATTATGCAGTTCAATGGGTATATCGCTTCATTTGTTCAGGTTCGAGGTTCAATTCCACTGCTCTGGCAGCAAATTGTTGACTTAACATATAAACCTAAGTTTGAGTTATTGAAACTCGAGGAAGCTCCACGAGTCCTTGAGAGGCATTTCTTAGATTTAAGAAAAAAATATGGAGCAGTTTTGGCTGTTGATCTTGTTAACAAGCATGGAGGAGAAGGGCGTCTGTGTGAAAAATTTGGCAGTACAATGCAGCATGTGGCTAGTGATGATGTAAGATATCTGCACTTTGATTTCCATCATGTCTGCGGGCACATTCATTTTGATCGTCTCTCAATCCTTTATGATCAAATTTCAGATTTTCTTGAGAGAAANGGATATCTTCTGTTGAATGAAAAGGGAGAGAAAATGAAGGAGCAACTTGGAGTTGTTAGGACCAATTGTATTGATTGTCTAGACCGTACAAATGTAACTCAGAGCATGATAGGCCGAAATATGTTAGAATACCAGCTTAGAAGGCTTGGTGTCTTTGGGGCTGAAGAAACCATTAGTTCACATCCAAATCTTGATGAAAGGTTTAAGATCTTGTGGGCTAATCATGGGGATGATATAAGTAGTCAATATTCAGGAACTCCTGCTCTGAAAGGAGACTTTGTCAGGTTTGGGCACCGCACAATGCAAGGGATACTAAATGATGGTTGGAATGCTCTTCAAAGATATTATTTGAATAATTTTCGTGATGGAACAAAGCAGGATGCGATTGATCTCCTGCAAGGACATTATATAGTTTCCGTCAGCCGAGATACAGCTGCCTCTTCTCAGAAAGGAGGCCTTGAAGCTATAGCTGTTTACAGATTGGTCTCAACCCTACAGAAAAGTGGCGGGTTGGAATGGGCCACAAGGATGAAATACCACACGAAGCCAAGTGTCATTTCCTCTGGCTTTGGCTCTGGTTTTGACTGGATTTCTTTTTGCAACCATGTCATTGAAGCAAGTCATTACTTGGATCCTCTTTCTGTTGTCAGCTGTAGACTTGTAGTTGTTACTGCTGTTACTACAAATTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00037	430195	441090	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0042578 phosphoric ester hydrolase activity

GO:0052866 phosphatidylinositol phosphate phosphatase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000037s00002664.1	PF02383.13	Syja_N	66	358	1.80E-85
Glyur000037s00002664.2	PF02383.13	Syja_N	66	358	1.90E-85
Glyur000037s00002664.3	PF02383.13	Syja_N	66	354	1.20E-78

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.793
SRR1783600	control	8.578
SRR1783602	moderate drought stress	7.206
SRR1811619	moderate drought stress	6.785

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.753
DRR006520	Root Summer glycyrrhizin high producing strain	9.281
DRR006521	Root Winter glycyrrhizin high producing strain	9.313
DRR006522	Root Winter glycyrrhizin high producing strain	9.065
DRR006523	Root Summer glycyrrhizin low producing strain	10.331
DRR006524	Root Summer glycyrrhizin low producing strain	10.332
DRR006525	Leaf Summer glycyrrhizin high producing strain	10.925
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.673

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	26.660
SRR2868004	Drought Stress (root)	25.719
SRR2967015	Control (root)	24.268

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	14.143
SRR9715740	Leaf	14.296
SRR9715741	Leaf	19.050
SRR9715739	Root	5.434
SRR9715742	Root	9.806
SRR9715743	Root	9.699

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	20.851
SRR8749028	MeJA induced 9h	34.507
SRR8749029	MeJA induced 9h	17.258
SRR8749030	Uninduced	4.246
SRR8749031	Uninduced	3.907
SRR8749032	Uninduced	1.867

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	25.071
SRR8400027	Control - Root	26.231