Gene detail information of Glyur000037s00002663 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G58170.1 | 1.00E-04 | Disease resistance-responsive (dirigent-like protein) family protein |
| NR | AFK48041.1 | 1.28E-113 | unknown [Lotus japonicus] |
| Swissprot | tr|Q84TH6|DIR23_ARATH | 5.00E-09 | Dirigent protein 23 (Precursor) |
| trEMBL | tr|I3T699|I3T699_LOTJA | 5.00E-114 | Uncharacterized protein {ECO:0000313|EMBL:AFK48041.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00037 | 429163 | 429744 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000037s00002663.1 | PF03018.9 | Dirigent | 43 | 183 | 2.90E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 53.339 |
| SRR1783600 | control | 54.705 |
| SRR1783602 | moderate drought stress | 42.029 |
| SRR1811619 | moderate drought stress | 41.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.212 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.665 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.106 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.374 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.975 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.937 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 36.524 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 36.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 54.666 |
| SRR2868004 | Drought Stress (root) | 69.169 |
| SRR2967015 | Control (root) | 62.618 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 34.785 |
| SRR9715740 | Leaf | 23.098 |
| SRR9715741 | Leaf | 50.219 |
| SRR9715739 | Root | 147.584 |
| SRR9715742 | Root | 144.479 |
| SRR9715743 | Root | 144.953 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 156.967 |
| SRR8749028 | MeJA induced 9h | 150.742 |
| SRR8749029 | MeJA induced 9h | 148.570 |
| SRR8749030 | Uninduced | 125.355 |
| SRR8749031 | Uninduced | 28.492 |
| SRR8749032 | Uninduced | 51.409 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 112.537 |
| SRR8400027 | Control - Root | 78.897 |