Gene detail information of Glyur000037s00002652 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17550.2 | 3.00E-96 | |
| NR | XP_006590752.1 | 0 | PREDICTED: uncharacterized protein LOC100779720 isoform X1 [Glycine max] |
| trEMBL | tr|K7LNP3|K7LNP3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G09131.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00037 | 359168 | 364473 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000037s00002652.1 | PF14383.1 | VARLMGL | 92 | 108 | 6.40E-06 |
| Glyur000037s00002652.1 | PF14309.1 | DUF4378 | 719 | 888 | 1.10E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.806 |
| SRR1783600 | control | 14.751 |
| SRR1783602 | moderate drought stress | 11.457 |
| SRR1811619 | moderate drought stress | 11.370 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.874 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.136 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.245 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.223 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.691 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.622 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.342 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.291 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.049 |
| SRR2868004 | Drought Stress (root) | 6.258 |
| SRR2967015 | Control (root) | 6.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.799 |
| SRR9715740 | Leaf | 12.518 |
| SRR9715741 | Leaf | 14.272 |
| SRR9715739 | Root | 1.484 |
| SRR9715742 | Root | 6.425 |
| SRR9715743 | Root | 5.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.689 |
| SRR8749028 | MeJA induced 9h | 4.280 |
| SRR8749029 | MeJA induced 9h | 1.781 |
| SRR8749030 | Uninduced | 3.974 |
| SRR8749031 | Uninduced | 0.973 |
| SRR8749032 | Uninduced | 0.606 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.367 |
| SRR8400027 | Control - Root | 15.959 |