Gene detail information of Glyur000037s00002641 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38250.1 | 3.00E-122 | Transmembrane amino acid transporter family protein |
| NR | XP_004512278.1 | 0 | PREDICTED: proton-coupled amino acid transporter 4-like [Cicer arietinum] |
| Swissprot | tr|O22719|LHTL3_ARATH | 2.00E-10 | Lysine histidine transporter-like 3 |
| trEMBL | tr|G7K191|G7K191_MEDTR | 0 | Transmembrane amino acid transporter family protein {ECO:0000313|EMBL:AES95330.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00037 | 317283 | 318560 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000037s00002641.1 | PF01490.13 | Aa_trans | 31 | 415 | 1.90E-68 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 46.110 |
| SRR1783600 | control | 47.966 |
| SRR1783602 | moderate drought stress | 66.746 |
| SRR1811619 | moderate drought stress | 65.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.798 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.106 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.786 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.003 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.061 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.769 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.857 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 88.906 |
| SRR2868004 | Drought Stress (root) | 89.216 |
| SRR2967015 | Control (root) | 78.468 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.767 |
| SRR9715740 | Leaf | 14.889 |
| SRR9715741 | Leaf | 15.815 |
| SRR9715739 | Root | 23.303 |
| SRR9715742 | Root | 24.535 |
| SRR9715743 | Root | 27.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.105 |
| SRR8749028 | MeJA induced 9h | 5.142 |
| SRR8749029 | MeJA induced 9h | 3.873 |
| SRR8749030 | Uninduced | 11.377 |
| SRR8749031 | Uninduced | 8.452 |
| SRR8749032 | Uninduced | 6.509 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 43.314 |
| SRR8400027 | Control - Root | 48.891 |