Gene detail information of Glyur000037s00002634 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G61090.1 | 6.00E-08 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
| NR | AFK48593.1 | 1.14E-20 | unknown [Lotus japonicus] |
| trEMBL | tr|I3T7V1|I3T7V1_LOTJA | 4.00E-21 | Uncharacterized protein {ECO:0000313|EMBL:AFK48593.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00037 | 285197 | 285523 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000037s00002634.1 | PF13456.1 | RVT_3 | 1 | 74 | 1.80E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.802 |
| SRR1783600 | control | 6.570 |
| SRR1783602 | moderate drought stress | 2.875 |
| SRR1811619 | moderate drought stress | 2.894 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.468 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.950 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.341 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.333 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.672 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.658 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.489 |
| SRR2868004 | Drought Stress (root) | 3.163 |
| SRR2967015 | Control (root) | 3.928 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.198 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 1.627 |
| SRR9715742 | Root | 1.050 |
| SRR9715743 | Root | 0.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.731 |
| SRR8400027 | Control - Root | 4.978 |