Gene detail information of Glyur000037s00002632 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G65980.1 | 1.00E-100 | Auxin efflux carrier family protein |
| NR | XP_003517128.1 | 0 | PREDICTED: uncharacterized transporter YBR287W-like isoformX2 [Glycine max] |
| trEMBL | tr|I1J8B4|I1J8B4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G36190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00037 | 273058 | 277695 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000037s00002632.1 | PF03547.13 | Mem_trans | 10 | 317 | 3.10E-58 |
| Glyur000037s00002632.2 | PF03547.13 | Mem_trans | 10 | 317 | 3.10E-58 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.664 |
| SRR1783600 | control | 3.768 |
| SRR1783602 | moderate drought stress | 1.562 |
| SRR1811619 | moderate drought stress | 1.574 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.304 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.313 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.494 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.267 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.180 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.047 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.076 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.287 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.412 |
| SRR2868004 | Drought Stress (root) | 13.887 |
| SRR2967015 | Control (root) | 7.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 36.779 |
| SRR9715740 | Leaf | 30.108 |
| SRR9715741 | Leaf | 48.489 |
| SRR9715739 | Root | 1.846 |
| SRR9715742 | Root | 3.576 |
| SRR9715743 | Root | 3.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 33.526 |
| SRR8749028 | MeJA induced 9h | 73.629 |
| SRR8749029 | MeJA induced 9h | 61.545 |
| SRR8749030 | Uninduced | 175.092 |
| SRR8749031 | Uninduced | 208.335 |
| SRR8749032 | Uninduced | 83.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.206 |
| SRR8400027 | Control - Root | 8.307 |