Gene detail information of Glyur000037s00002630 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G42960.1 | 3.00E-27 | |
| NR | XP_004512285.1 | 8.64E-85 | PREDICTED: thylakoid membrane protein ssl2009-like [Cicer arietinum] |
| trEMBL | tr|G7K2K1|G7K2K1_MEDTR | 3.00E-81 | Transmembrane protein, putative {ECO:0000313|EMBL:AES95364.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00037 | 263320 | 267163 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.141 |
| SRR1783600 | control | 12.854 |
| SRR1783602 | moderate drought stress | 5.614 |
| SRR1811619 | moderate drought stress | 6.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.353 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.811 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 39.022 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 38.520 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.984 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.676 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.204 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.409 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 60.125 |
| SRR2868004 | Drought Stress (root) | 30.532 |
| SRR2967015 | Control (root) | 28.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.890 |
| SRR9715740 | Leaf | 9.699 |
| SRR9715741 | Leaf | 8.857 |
| SRR9715739 | Root | 16.116 |
| SRR9715742 | Root | 19.302 |
| SRR9715743 | Root | 16.390 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 28.097 |
| SRR8749028 | MeJA induced 9h | 9.883 |
| SRR8749029 | MeJA induced 9h | 19.185 |
| SRR8749030 | Uninduced | 8.215 |
| SRR8749031 | Uninduced | 4.912 |
| SRR8749032 | Uninduced | 7.183 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 75.371 |
| SRR8400027 | Control - Root | 69.875 |