Gene detail

Gene detail information of Glyur000037s00002628

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G17480.1	Seven transmembrane MLO family protein
NR	XP_003517123.1	PREDICTED: MLO-like protein 8-like isoform 1 [Glycine max]
Swissprot	tr\|O22757\|MLO8_ARATH	MLO-like protein 8
trEMBL	tr\|I1J8B2\|I1J8B2_SOYBN	MLO-like protein {ECO:0000256\|RuleBase:RU280816}

Sequence

Transcript Sequence

>Glyur000037s00002628.1
GTAATTTTCACTCTAATAAGAAAGAGAAACATTTTGTTTCTTTCATTTGTTTTTTCTTTTTTCCTTCTAAAACAAATAAATAATGTTGAAGCAATGGGGAACNGTTTGAACTGGATATACGTACGAACGAGCCTGTGACTACTTCATCAGCACTTGCCTGAAGCTTTCTTCACTCTATTTGGTGTCCCATTTACCCAAAATTGAACACACTTTCGAAGTTTCTTAGAAGAAGCAACAGATATTGTATATATATAAAAGCTTTTTCTTTTATTTCCTTCACAAAGAACCCAGATACATAAATTGAAAGCTTTTAACCACTTTCTGAGAACNCAATTTTCCTCATATCCATTATGTATAGCTCCAAGTTCAAAAGGGTGTTTTATTGTGTGTTCTCTTCATGGGTCTATTATGGAGGTTTGGGTGCCATGGCAGCAAGTGGAAGTAGCAGCAGTGCCAGAGAACTTGATCAGACACCAACATGGGCTGTTGCTACTGTGTGCACTGTTTTCATCTTGATATCCATAGCCCTTGAGATGAGTCTTCACAAATTGGGCACGTGGCTAGGAAAAAAGCAAAAGAGGGCTTTGCTCGAAGCTCTGGATAAGGTCAAGGCTGAGTTGATGATTTTAGGATTCATTTCACTGCTTTTGACTTTCGGGCAGAGTTACATTGTCCAAATATGTGTTCCTGTGAAAGTTGCAAACAGAATGTTGCCATGTCCATATAAATATGAGTTTGCTGACGATGCATCAAGTGATGAAGAGGAACATCGTAGGAAGCTTCTGTCTTATGAACGTAGATATTTAGCTGCTGATACTACCTCCTACAAATGCAGCAGGGAGGGACATGAGCCGCTATTATCTGTCAATGGATTGCACCAGTTACACATCCTCATATTTTTCCTAGCAGTCTTTCATGTTCTTTACAGTGCTGTCACAATGCTTCTTGGGAGACTAAAGATACGTGGATGGAAGGCTTGGGAGGAAGAGACTTCATCTCATGGATATGAGTTTGCCAATGATGCTGCAAGATTCAGGCTCACTCATGAAACATCATTCGTGAGAGCCCATACCAGTTTTTGGACAAAGACTTCTATCTTCTTCTATATTGGCTGCTTCTTTAGGCAGTTTTATAGGTCTGTGCGTAAGGTTGACTACCAGACTTTGCGCAATGGGTTTATCAGTTATATCAAAAGATCATTAGAAGATGACTTCAAGGTGGTTGTGGGAGTCAGTCCTGTACTCTGGGCATCAGTTGTAGTTTTCCTGCTCGTAAACATTAATGGATGGCGTACTCCAATATGGGCATCCTTAATTCCTATTTTTATAATTTTGGCTGTTGGAACAAAACTTCAAGTCATATTAGCAAAGATGGCTCTTGAAATGACAGATAGACATGCAGTTGTTCAAGGAATGCCTCTTGTTCAAGGCTCAGACAAATACTTTTGGTTTGGTCAGCCCCAGTTAGTTCTTCATCTTATCCATTTTGCTTTGTTCCAGAATTCATTCCAAATAACATATATCTTGTGGACATGGTATTCNTTTGGGTTGGAAAATTGTTTCCGTGTTGACTACAAGCTTGCCATTATAAAAGTAGCTTTCGGGATTGTGATGCTATGCCTCTGCAGCTACATCACCCTTCCATTATATGCTCTTGTAACTCAGATGGGTTCAAGGATGAAAAGGTCAGTATTTGATGAACAAACATCCAAGGCATTGAAGAAATGGCACATGGCTGTGAAAAAGAAGCAGGGGACAGTGAAGCTAGGGAAGTCCAATGCAGGAACCATGGATGGAATTGGAAGCACCATTGGTTCAATGGGGAACTCCTCTGGGCCCACACTTCACCGTTTCAAAACCACTGGTCACTCAACCCGCTCTAATTCCACCTTGGAGGATCAAGATGATGAAGATTATGAATCTGATAATGGTGTTGAGTTGTCTCCCATAACGCCAGCAACCAGCTTGATTGTGAGAGTTGATCATGGTGAGAAAGAAGCAGAAGATAGAGAAACCAACAATGAAGATGACTTCACATTTTTCAAGCCTGACCCTTTGGAAAGAACCACCACGTAGCATTTAAAGTTACTACTCCATATTCAACTTCTTTCTTTTTTGGGTTGCATGTATGATGTATCTTTACCCTTTTAAATTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00037	252717	259619	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006952 defense response

cellular_component
GO:0016021 integral component of membrane

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000037s00002628.1	PF03094.10	Mlo	35	500	1.30E-196

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	16.654
SRR1783600	control	16.549
SRR1783602	moderate drought stress	18.537
SRR1811619	moderate drought stress	18.722

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	40.150
DRR006520	Root Summer glycyrrhizin high producing strain	40.032
DRR006521	Root Winter glycyrrhizin high producing strain	32.939
DRR006522	Root Winter glycyrrhizin high producing strain	32.047
DRR006523	Root Summer glycyrrhizin low producing strain	112.571
DRR006524	Root Summer glycyrrhizin low producing strain	113.470
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.140
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.110

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.119
SRR2868004	Drought Stress (root)	10.791
SRR2967015	Control (root)	13.120

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	47.810
SRR9715740	Leaf	42.648
SRR9715741	Leaf	36.708
SRR9715739	Root	25.797
SRR9715742	Root	43.453
SRR9715743	Root	44.047

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.236
SRR8749028	MeJA induced 9h	4.664
SRR8749029	MeJA induced 9h	8.350
SRR8749030	Uninduced	7.072
SRR8749031	Uninduced	2.600
SRR8749032	Uninduced	3.855

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	23.352
SRR8400027	Control - Root	36.640