Gene detail information of Glyur000037s00002620 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G19100.1 | 9.00E-21 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein |
| NR | XP_004512434.1 | 0 | PREDICTED: MORC family CW-type zinc finger protein 3-like [Cicer arietinum] |
| trEMBL | tr|G7K2L3|G7K2L3_MEDTR | 0 | CW-type zinc finger protein {ECO:0000313|EMBL:AES95376.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00037 | 176555 | 193364 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000037s00002620.1 | PF13589.1 | HATPase_c_3 | 195 | 308 | 4.10E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.411 |
| SRR1783600 | control | 0.478 |
| SRR1783602 | moderate drought stress | 0.386 |
| SRR1811619 | moderate drought stress | 0.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.033 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.812 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.799 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.038 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.449 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.415 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.494 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.636 |
| SRR2868004 | Drought Stress (root) | 0.887 |
| SRR2967015 | Control (root) | 1.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.503 |
| SRR9715740 | Leaf | 0.143 |
| SRR9715741 | Leaf | 0.525 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.115 |
| SRR9715743 | Root | 0.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.789 |
| SRR8749028 | MeJA induced 9h | 12.705 |
| SRR8749029 | MeJA induced 9h | 8.060 |
| SRR8749030 | Uninduced | 4.003 |
| SRR8749031 | Uninduced | 2.462 |
| SRR8749032 | Uninduced | 3.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.193 |
| SRR8400027 | Control - Root | 1.042 |