Gene detail information of Glyur000037s00002617 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | CAN62137.1 | 1.86E-20 | hypothetical protein VITISV_017372 [Vitis vinifera] |
| trEMBL | tr|A5C6E0|A5C6E0_VITVI | 7.00E-21 | Putative uncharacterized protein {ECO:0000313|EMBL:CAN62137.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00037 | 140325 | 144179 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 25.027 |
| SRR1783600 | control | 24.762 |
| SRR1783602 | moderate drought stress | 16.979 |
| SRR1811619 | moderate drought stress | 18.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.575 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.292 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.386 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.042 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.991 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 24.260 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 25.626 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 25.627 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.641 |
| SRR2868004 | Drought Stress (root) | 1.773 |
| SRR2967015 | Control (root) | 0.804 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.480 |
| SRR9715740 | Leaf | 2.015 |
| SRR9715741 | Leaf | 1.513 |
| SRR9715739 | Root | 0.278 |
| SRR9715742 | Root | 2.115 |
| SRR9715743 | Root | 0.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.843 |
| SRR8749028 | MeJA induced 9h | 4.580 |
| SRR8749029 | MeJA induced 9h | 8.780 |
| SRR8749030 | Uninduced | 9.083 |
| SRR8749031 | Uninduced | 5.513 |
| SRR8749032 | Uninduced | 8.650 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.779 |
| SRR8400027 | Control - Root | 1.966 |