Gene detail

Gene detail information of Glyur000037s00002610

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G04160.1	5.00E-143	Subtilisin-like serine endopeptidase family protein
NR	XP_004512297.1	0	PREDICTED: subtilisin-like protease-like isoform X1 [Cicer arietinum]
COG	YP_004097803.1	4.00E-97	peptidase S8 and S53 subtilisin kexin sedolisin [Intrasporangium calvum DSM 43043]
Swissprot	tr\|Q9ZSP5\|AIR3_ARATH	2.00E-174	Subtilisin-like protease SBT5.3 (Precursor)
trEMBL	tr\|G7K2N3\|G7K2N3_MEDTR	0	Subtilisin-like serine protease {ECO:0000313\|EMBL:AES95396.1}

Sequence

Transcript Sequence

>Glyur000037s00002610.1
AACGTTACATGACACATACTCATGTTACAACTGCAACCATGATTCTAGTTCTAATAACCCTCCTCTAACTCCATCTGGGCTTTCCTTTTTTTTTTATTCTTCTTTTTCTTGTTTTGTTTTCAATCCCCAGGATTTTGAATTGGAAGCCATTNTACTGAATTTAGCTAAAGGTTGGGGCTTTGAATTTGAACAATGTCTTGTTGTTCCACATACGCTAGAAGCAGTGGCTTCTTCTTTTATNTGTTTCTTGCAGTGCTTGTTGCAAAGACTAGCTTTTGCTTCTCTACTAAGTGGCAGGTTTATGTGGTGTACATGGGAAACAAAAGCGGACAAGACCCAGATGATATTCTGAATCACAACCATCAAATGCTTGCATCTGTTCACAGTGGAAGTGTTGAACAAGCCCAAGCTTCCCATGTTTATAGCTATAGACATGGNTTCAGAGGTTTTGCTGCCAAACTGACTGATGAACAGGCTTACCAAATTTCAAAAATGCCAGGAGTGGTTTCTGTATTCCCCAATTCTAAAAGGAAGTTGCACACTACTCATTCATGGGACTTCATGGGACTTGTGGATGACAATACCATGGGGAAGAATATGGGGTATTCCACCAAAAACCAAGCAAATGTCATTATTGGTTTCATTGACACTGGAATTTGGCCTGAATCCCCAAGCTTTAGAGACACTGACATGCCACCAGTGCCACGCGGATGGAAAGGCCATTGTCAATTGGGAGAAGCATTCAATGCTTCATCTTGCAACAGGAAAGTGATAGGAGCTAGATACTACAAGAGTGGATATGAGGCAGAAGAAGAANGGTCAGAGAGAAAAGTCACTTTCAGATCTGCAAGGGATAGCTCTGGTCATGGGAGCCACACAGCTTCCACAGCAGCAGGGCGCCACGTGGCAAACATGAATTATAAGGGCCTTGCAGCTGGAGGAGCTAGGGGAGGTGCACCTNTGGCTAGGATTGCTGTGTACAAAACATGTTGGGATTCTGGTTGCTATGATGTGGACTTGTTGGCTGCCTTTGATGATGCCATAAGAGATGGGGTTCACATCATNTCTTTATCTCTTGGTCCTGAGGCTCCACAAGGTGACTATTTCAATGATGCCATATCTGTGGGGTCTTTCCATGCTGCTAGTCATGGGGTGCTTGTAGTAGCATCAGCTGGGAATGAAGGAAGTCCANGATCTGCTACAAACCTTGCACCATGGATGATCACTGGTGAGAGTCTNAGTTTATTGGAAATGAATGCCTCCAGAAGAACAATTCCTGCATCTGAAGCTTTTGCAGGATATTTTACTCCTTATCAATCCAGTTTCTGTTTAGATAGCTCCCTAAACAAGACCAAGGCCAAAGNGAAGGTTCTGGTGTGTCGACATGCAGAGGGTTCAACGGATTCAAAGTTGGAAAAAAGCAAGGTAGTGAAAGAGGCAGGTGGAATTGGAATGATACTTATTGATGAGACAGATCAAGATGTTGCCATCCCATTTGTGATCCCTTCAGCTATTGTTGGAAGGAAAATTGGAGAAAGGATTCTATCCTATATCAATAGCACACGTGCGCCTATGTCAAGGATTTTGGGAGCCAAGACAGTACTAGGAGTTCAGCCTGCACCACGTGCAGCAGCATTTTCTTCCAAAGGCCCCAATGCCTTAACCCCAGAAATTTTGAAGCCGGATATTACAGCTCCCGGGTTAAACATCCTCGCAGCATGGTCTCCAGCAGCAGCTGGAAACATGAAGTTCAATATTCTATCTGGAACTTCTATGGCTTGTCCTCATATAACTGGAATTGCAGCCTTAGTCAAAGCTGTGCATCCTTCATGGTCCCCNTCTGCTATCAAGTCTGCCATCATGACAACCGCAACTATTCTGGATAAGCAACACCAACCCATCAGAGCCGATCCTGATAGAAGAAGGGCTAATGCATTCGATTTCGGATCCGGGTTTGTGAACCCCNTGAGAGTTCTGGATCCAGGCCTCGTATATGACTCACATCCACAAGATTTTGTTGCATTTCTCTGTTCACTTGGTTATGATGAGAGGTCNCTCCATCTTGTTACAGGAGACAACAACAGCACGTGTGAAGGGGCATTCAAAACACCATCTAACCTCAACTATCCATCTATTGCNGTGCCCAATCTTGAAGAAAGCTTTTCAGTATCTCGGGTTGTGACTAATGTTGGAAGAGCAAGGAGTATATATGAAGCTGTAGTGTTGTCTCCAGCTGGAGTTAATGTTACTGTTGTGCCAAACCGGTTAGTGTTTACAAGAACAGGACAGAGAATCAAGTTCACTGTGAATTTCAAAGTGGTTGCTCCCTCAAAGGGCTATGCATTTGGGTTCTTATCATGGAAAAACAGAAGATCACATTCACAGGTCACTAGTCCTTTAGTTGTTCGGGTTGCACCAGCAAGCCTTGGGTTGGTCAGATAACAATGCTTGTAAATGTGTATATTAGCTTTCAGGAGCTGTGAGAATTGAGANCCCTATAGCCACTATAAGAACAAACAGTCATATACTCAAATCCTAATGCAAACTAGATGATCACTGTCAAACTAGATGATACCAAACGCAGAGTTCGAAGAAGTGATATCTTGATGCCCTCAATTTCATCATTATTTGTTAGTTATCACAAGAAAACTTTGCTATGTGGGATTGTAGGTTGGTCTAGTATACTTGTATTTGGTGGTCTTTTCTCACTGAAGTGGGAACTGTGAAGTTAAAATAGTGTGGTAATTATTTTAAGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00037	91167	95931	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004252 serine-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000037s00002610.1	PF05922.11	Inhibitor_I9	36	116	8.90E-18
Glyur000037s00002610.1	PF00082.17	Peptidase_S8	148	595	1.10E-38
Glyur000037s00002610.1	PF02225.17	PA	370	454	4.10E-14

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.312
SRR1783600	control	5.293
SRR1783602	moderate drought stress	7.945
SRR1811619	moderate drought stress	7.790

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.013
DRR006520	Root Summer glycyrrhizin high producing strain	8.853
DRR006521	Root Winter glycyrrhizin high producing strain	2.008
DRR006522	Root Winter glycyrrhizin high producing strain	1.825
DRR006523	Root Summer glycyrrhizin low producing strain	20.916
DRR006524	Root Summer glycyrrhizin low producing strain	20.915
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.910
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.824

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	18.522
SRR2868004	Drought Stress (root)	29.186
SRR2967015	Control (root)	25.442

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	7.312
SRR9715740	Leaf	13.681
SRR9715741	Leaf	11.258
SRR9715739	Root	3.017
SRR9715742	Root	14.455
SRR9715743	Root	12.079

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.841
SRR8749028	MeJA induced 9h	2.168
SRR8749029	MeJA induced 9h	1.122
SRR8749030	Uninduced	1.201
SRR8749031	Uninduced	3.106
SRR8749032	Uninduced	4.399

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	26.294
SRR8400027	Control - Root	33.929