Gene detail information of Glyur000037s00002609 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G51500.1 | 2.00E-19 | |
| NR | NP_001236389.1 | 3.95E-80 | uncharacterized protein LOC100527461 [Glycine max] |
| trEMBL | tr|C6T4E3|C6T4E3_SOYBN | 1.00E-80 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G09430.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00037 | 88814 | 90593 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.484 |
| SRR1783600 | control | 12.439 |
| SRR1783602 | moderate drought stress | 13.209 |
| SRR1811619 | moderate drought stress | 12.991 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 29.044 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 28.386 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 22.954 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.138 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.428 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.704 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.598 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.565 |
| SRR2868004 | Drought Stress (root) | 43.947 |
| SRR2967015 | Control (root) | 46.852 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 29.273 |
| SRR9715740 | Leaf | 29.735 |
| SRR9715741 | Leaf | 35.678 |
| SRR9715739 | Root | 15.994 |
| SRR9715742 | Root | 20.610 |
| SRR9715743 | Root | 16.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 36.885 |
| SRR8749028 | MeJA induced 9h | 44.144 |
| SRR8749029 | MeJA induced 9h | 54.692 |
| SRR8749030 | Uninduced | 75.523 |
| SRR8749031 | Uninduced | 117.085 |
| SRR8749032 | Uninduced | 87.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.034 |
| SRR8400027 | Control - Root | 34.733 |