Gene detail

Gene detail information of Glyur000037s00002604

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT5G65930.2	kinesin-like calmodulin-binding protein (ZWICHEL)
NR	XP_004512302.1	PREDICTED: kinesin-like calmodulin-binding protein homolog [Cicer arietinum]
Swissprot	tr\|Q7XPJ0\|KCBP_ORYSJ	Kinesin-like calmodulin-binding protein homolog
trEMBL	tr\|B9SRC0\|B9SRC0_RICCO	Calmodulin binding protein, putative {ECO:0000313\|EMBL:EEF33851.1}

Sequence

Transcript Sequence

>Glyur000037s00002604.1
ATGAGAAATGGAGTATATGTGTACTTTTTAATCATGCAGTGGAGGGAGCTTGAAGAAGAGCAAACCTTTTTGGCAAGTAAAATGATCATTGATATGCCACCTTCTGGGGCACAAAGTGTGAGGACAAACAGATCTTCCTTTGGTTCTAGCAATGCCAATGAGAATACCCCTCTACACAGCTATGCCACTGTTAGCAATGGTGATGACTATGACAGTGATGGCAGCAATTTTGTTTTTTTCACACCAAACACACTATCAATGGCTATTCCAGCAGAACTCGCTGGAGCTGTACCCTTGATTGATAAATTCCAGGTTGAAGGGTTTTTAAAATTGATGCATAAACAAATTCAATCTGCTGGGAAACGTGGATTTTTTTCCAAATTTTTTTTAGGTCCCCAGCTGACTCTCAAATTCCTGCAGGATCCAATACCAACATCATTGCTTAAGCTGAATGGTGATTTGGCAAGCCGAGCAACTTTTTTTTTCCAGATAATTTTGAAATATATGGGAGTTGATTCATCTCCAATAAGCTTAGAGGAACGAGTTGAGGTAGTAGGTAAACTGTACAAACAAAGTTTGAAGCGTTCAGAACTCCGAGATGAACTTTTTGTCCAGATATCAAAGCAAACACGAAACAATCCAGAGAGGGAATACTTGATTAAGGCATGGGAGCTAATGTATTTATGTGCATCCTGCATGCCTCTTTTTTTAGACTTTGGAGGATATATGTCAGAATATGTTCATAACGTGGCACATGGTGTGACTACCGATCTTGAGATCCGAGCCCTTGCATTAAATACGCTAATTTTTTTGAAGCGCTCCGTCAAGGCTGGTCCTAGGCATATAATACCCGGGCCTGTCGAGATTGAAGCTCTGTTGACTGGGAGAAAGCTTACAACAATAGTCTTTTTTTTGGATGAAACATTTGAAGAAATTACATATGACATGTCAACAACTGTTTTTTTCGCTGTTGAGGAACTTGCAGGGATCATTAAACTGTCGACATACTCTATTTTTTTCCTGTTTCAATGTCATAAAGTTGTTACCAGTTCCAAATCACCTGTTTTTTTGAGTGAGGAGTACATTGGGTTAGATGATAATAAACATATCGGGGATCTACTGGCGGAATTTAAGGCAGTGAAAGATCGAAGCAAGGGAGAAATTTTGCAGTGTAAACTGTTATTTCGTGAATCAGATGAAGTCGTGACAGATCCAATGGATGATGCTTCCAAGCTTTCTGCATTGCAAATCTTGGCTGAGATTGGATTTGTCAGAAGACCTGAATCATGCGCTGACTGGAATTCATTTCTGGAGCGATTTCTGCCTTTTTTTCTTGCAATGACTCGAGCGAAACGGGAATGGGAGTTGGACATTCTTTCTTGCTATCATTCATTGGAGCATGTGACAAAAGAAGATGCAAGACAACAATTTTTGCATATATTAAGAACACTTCCTTTTTTTTTTTCTGTATTTTTCAATGTCCGCAAAATTGATGATCCTATTGGACTCCTACCTGGACGAATAATATTAGGAATTAACAAGAGAGGGGTTCATTTTTTTCGTCCCATTCCCAAGGAATATTTGCACTCAGCTGAATTGAGAGACATAATGCAATTTGGAAGCAGTAATACTGCTGTATTTTTTAAAATGCGAGTTGCAGGTGTTCTACACATATTCCAATTCGAAACCAAGCAGTTGCTGGAAAATTTTTTTGAGAAACAAAAACAAGAAGAGGAGATGCTCCAAGAATTAGAGGGTTTTTTTCAATCTTTAAAAACTTCTAAGCATAGTCTTGCAGAAGTTACAGATGACCGTGATAGGCTTAGGTCATTATGCGATAAAAAAGATAAGGAACTTCAGAGCACTACTAAAACGGACCCCATTGGAACAAATGACCAAGTGTTACAAAAACTTGAAGATGACTTAAAACTTAGTAGAGATGAGTGCCTGGTAGCTGAAGAGACCATCAAAAGCCTGACAAATGAGAAGTTGATTTTGGCACAAAAGCTATCTGAGCTTGAGAAGAAGAATGCTGAAGAGATTAGTTCTGTTCAATGGAAGCTTGAGCAAGAACGCATTTTTTTGAACTCTCAAGTGTATGACCTCGAAAGAAAACTTGATTCTACACTTTCGGCAAAGGACTCTGAATTTTTTTTGTTAAAGAACAATTTAAAAGAACTAGAAGAATTGAGAGAAATGAAAGAGGACATTGATAGAAAGAATGAACAAACAGCTGCCATATTGAAGATGCAAGGGGCTCAACTAGCTGAAATGGAAGTGCTTTATAAGGAAGAGCAGGTTCTCAGGAAGCGATACTTTAATACCATTGAAGGTGGCAAAATAAGAGTTTACTGTCGGCTAAGACCTCTTGGTGAAAGAGAGATTGCTGACAAAGAAAGAGGTGTTCTTACAACCATAGATTTTTTTTCTGTTGAGCATCCATGGAGAGATGATAAACCAAAACAGCACATTTATGATCGTGTGTTTGATGGTGATGCAACTCAAGAAGATTTTTTTTTGCAATCTGCTGTAGACGATCTTCTATTACCTAAGAATGCAAAACGATTAAAATTTTTTTTTAAGAAGGATTCAAAGAAAACGTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00037	67003	76561	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component

GO:0005856 cytoskeleton

GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000037s00002604.1	PF00784.12	MyTH4	180	292	1.40E-29
Glyur000037s00002604.1	PF09379.5	FERM_N	302	396	3.60E-05
Glyur000037s00002604.1	PF00373.13	FERM_M	407	489	7.10E-05
Glyur000037s00002604.2	PF00225.18	Kinesin	2	149	1.20E-49

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.755
SRR1783600	control	5.708
SRR1783602	moderate drought stress	4.244
SRR1811619	moderate drought stress	4.258

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.581
DRR006520	Root Summer glycyrrhizin high producing strain	5.477
DRR006521	Root Winter glycyrrhizin high producing strain	1.297
DRR006522	Root Winter glycyrrhizin high producing strain	0.991
DRR006523	Root Summer glycyrrhizin low producing strain	4.505
DRR006524	Root Summer glycyrrhizin low producing strain	4.301
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.291
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.449

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.551
SRR2868004	Drought Stress (root)	3.282
SRR2967015	Control (root)	4.484

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.584
SRR9715740	Leaf	1.988
SRR9715741	Leaf	0.693
SRR9715739	Root	0.238
SRR9715742	Root	1.281
SRR9715743	Root	1.111

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.437
SRR8749028	MeJA induced 9h	5.028
SRR8749029	MeJA induced 9h	1.968
SRR8749030	Uninduced	0.499
SRR8749031	Uninduced	0.211
SRR8749032	Uninduced	0.364

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	10.381
SRR8400027	Control - Root	10.066