Gene detail information of Glyur000036s00004693 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G42020.1 | 0 | Heat shock protein 70 (Hsp 70) family protein |
| NR | KHN16716.1 | 0 | Luminal-binding protein 5 [Glycine soja] |
| COG | YP_031785.1 | 0 | molecular chaperone DnaK [Bartonella quintana str. Toulouse] |
| Swissprot | tr|Q03685|BIP5_TOBAC | 0 | Luminal-binding protein 5 (Precursor) |
| trEMBL | tr|I1KPN3|I1KPN3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G02940.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00036 | 519241 | 523390 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000036s00004693.1 | PF00012.15 | HSP70 | 145 | 752 | 8.30E-271 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 55.457 |
| SRR1783600 | control | 55.705 |
| SRR1783602 | moderate drought stress | 28.891 |
| SRR1811619 | moderate drought stress | 28.896 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 95.746 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 94.575 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 31.897 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 30.202 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 53.348 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 52.188 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 43.487 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 42.765 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 214.062 |
| SRR2868004 | Drought Stress (root) | 118.982 |
| SRR2967015 | Control (root) | 130.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 130.411 |
| SRR9715740 | Leaf | 62.002 |
| SRR9715741 | Leaf | 134.467 |
| SRR9715739 | Root | 18.583 |
| SRR9715742 | Root | 73.558 |
| SRR9715743 | Root | 66.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 138.734 |
| SRR8749028 | MeJA induced 9h | 102.352 |
| SRR8749029 | MeJA induced 9h | 91.034 |
| SRR8749030 | Uninduced | 152.373 |
| SRR8749031 | Uninduced | 148.565 |
| SRR8749032 | Uninduced | 134.813 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 108.058 |
| SRR8400027 | Control - Root | 116.569 |