Gene detail information of Glyur000036s00004682 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006574175.1 | 5.03E-20 | PREDICTED: uncharacterized protein LOC102661460 [Glycine max] |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00036 | 478296 | 481349 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.433 |
| SRR1783600 | control | 21.423 |
| SRR1783602 | moderate drought stress | 25.624 |
| SRR1811619 | moderate drought stress | 24.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.038 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.610 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.118 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.113 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.834 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.595 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.280 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.941 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.180 |
| SRR2868004 | Drought Stress (root) | 0.700 |
| SRR2967015 | Control (root) | 0.224 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.268 |
| SRR9715740 | Leaf | 0.085 |
| SRR9715741 | Leaf | 0.237 |
| SRR9715739 | Root | 1.323 |
| SRR9715742 | Root | 0.320 |
| SRR9715743 | Root | 0.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.220 |
| SRR8749028 | MeJA induced 9h | 0.052 |
| SRR8749029 | MeJA induced 9h | 0.171 |
| SRR8749030 | Uninduced | 0.211 |
| SRR8749031 | Uninduced | 0.293 |
| SRR8749032 | Uninduced | 1.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.240 |
| SRR8400027 | Control - Root | 0.313 |