Gene detail information of Glyur000036s00004679 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10890.1 | 5.00E-24 | |
| NR | XP_004503591.1 | 0 | PREDICTED: uncharacterized protein LOC101489105 isoform X1 [Cicer arietinum] |
| trEMBL | tr|K7KRU8|K7KRU8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G36665.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00036 | 461239 | 468039 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000036s00004679.1 | PF10382.4 | DUF2439 | 5 | 75 | 3.90E-09 |
| Glyur000036s00004679.1 | PF10382.4 | DUF2439 | 131 | 205 | 6.90E-12 |
| Glyur000036s00004679.1 | PF10382.4 | DUF2439 | 246 | 322 | 4.60E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.438 |
| SRR1783600 | control | 4.280 |
| SRR1783602 | moderate drought stress | 4.542 |
| SRR1811619 | moderate drought stress | 4.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.673 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.453 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.986 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.961 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.784 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.465 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.099 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.261 |
| SRR2868004 | Drought Stress (root) | 2.083 |
| SRR2967015 | Control (root) | 2.690 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.439 |
| SRR9715740 | Leaf | 0.502 |
| SRR9715741 | Leaf | 0.454 |
| SRR9715739 | Root | 0.467 |
| SRR9715742 | Root | 1.701 |
| SRR9715743 | Root | 0.733 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.506 |
| SRR8749028 | MeJA induced 9h | 2.397 |
| SRR8749029 | MeJA induced 9h | 2.731 |
| SRR8749030 | Uninduced | 1.103 |
| SRR8749031 | Uninduced | 0.340 |
| SRR8749032 | Uninduced | 0.766 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.204 |
| SRR8400027 | Control - Root | 5.881 |